Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., cytochrome d ubiquinol oxidase subunit II from Dickeya dadantii 3937

 Score =  207 bits (527), Expect = 3e-58
 Identities = 115/329 (34%), Positives = 177/329 (53%), Gaps = 16/329 (4%)

Query: 5   LPEIYLLLLGFTVFMYAVLDGYDLGVGILLP-RNDVAQRDRMIASIGPFWDANETWLVLA 63
           L  I+  ++ F   MY V+DG+DLG+G+L P     A RD M+ ++ P WD NETWLVL 
Sbjct: 5   LSVIWFAIIIFATLMYIVMDGFDLGIGMLFPFHRHAADRDLMVNTVAPVWDGNETWLVLG 64

Query: 64  VGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFKIGSL 123
              L  AFP A+++I   L +P  LML+ LI RGVAF+FR KA   H+  WD  F  GSL
Sbjct: 65  GAGLFGAFPLAYAVIVDALTIPLTLMLVGLIFRGVAFEFRFKATPSHRPFWDQAFMWGSL 124

Query: 124 LAALTQGYMIGRYVVGFESAPEAYA---------FAVLSALCVAAAYVYIGGAWLVLKTE 174
           +A   QG  +G  + GFE     ++         F++   + +  AY  +G  WL++KT 
Sbjct: 125 VATFFQGVTVGAVLNGFEVTDRHFSGPVLGWLTPFSLFCGVGLVVAYALLGCTWLIMKTG 184

Query: 175 GELQVRAARWSRKAGWLAALGVLSVSLVNPWVNSAVAERWFSFPEVILLAPVPIIVFATI 234
            EL  R +  +          ++ +SL  P  + A+ +RWFS P +    PVP++V A  
Sbjct: 185 QELHRRMSALAPSLVVALLAVIVVISLWTPLAHPAIKQRWFSLPNLFWFLPVPLLVAACA 244

Query: 235 LVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQAASSPET 294
           + + R ++R    +      PF   + +  L F GL  S +P I+P  +T   AA+  ++
Sbjct: 245 VGIIRGVRRHAHYS------PFLLTLALIFLGFTGLGISLWPMIIPPSLTLWDAAAPAQS 298

Query: 295 LMVVGIGVVIVMPTILLYTFFVYRIFKGK 323
              + +G ++++P IL YTF+ Y +F+GK
Sbjct: 299 QGFMLVGALLIIPVILGYTFWSYYVFRGK 327