Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., Cytochrome d ubiquinol oxidase subunit 2 from Alteromonas macleodii MIT1002

 Score =  318 bits (815), Expect = 1e-91
 Identities = 164/327 (50%), Positives = 212/327 (64%)

Query: 3   QYLPEIYLLLLGFTVFMYAVLDGYDLGVGILLPRNDVAQRDRMIASIGPFWDANETWLVL 62
           + L  IY+ LLG +V +YA+LDGYDLGVG+L+P    A RD MIASIGP+WDANETWLVL
Sbjct: 8   EMLGNIYVGLLGLSVLLYAILDGYDLGVGVLIPPRTEAFRDDMIASIGPYWDANETWLVL 67

Query: 63  AVGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFKIGS 122
           A+G+LLIAFP AHS     LYLP   ML+ LIMRGVAFDFRAK     K  WD+ FK GS
Sbjct: 68  AIGLLLIAFPEAHSEFLQTLYLPATFMLLGLIMRGVAFDFRAKVVQVKKRKWDMVFKYGS 127

Query: 123 LLAALTQGYMIGRYVVGFESAPEAYAFAVLSALCVAAAYVYIGGAWLVLKTEGELQVRAA 182
           LL  L QGYM+G YV G  +   A  FA+L+A  V AAY +IG  WL+LK EGELQ +A 
Sbjct: 128 LLTTLAQGYMLGIYVTGLRTDIWAQGFALLAAFGVTAAYAFIGSCWLILKGEGELQQKAY 187

Query: 183 RWSRKAGWLAALGVLSVSLVNPWVNSAVAERWFSFPEVILLAPVPIIVFATILVVDRYLK 242
            W+R+   + A+G+++VS+ N  ++  V + W S P   +L  +P+  FA + +    LK
Sbjct: 188 YWARRGLGVLAVGIVAVSIANLTLHDDVRDLWLSAPWGYVLFAIPVACFALLALCGVLLK 247

Query: 243 RVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQAASSPETLMVVGIGV 302
           ++P     G   PFF  +L+F L F     S++P I+PG MT   A S   +L  + +GV
Sbjct: 248 KLPDAQGKGEWLPFFIALLVFLLCFTAFGISYYPFIIPGQMTVMDALSDASSLRFLLVGV 307

Query: 303 VIVMPTILLYTFFVYRIFKGKATDLSY 329
           VIV+P IL YT  VY+IF GK+  LSY
Sbjct: 308 VIVVPIILAYTAMVYKIFSGKSEKLSY 334