Pairwise Alignments

Query, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score =  200 bits (508), Expect = 2e-56
 Identities = 102/222 (45%), Positives = 150/222 (67%), Gaps = 1/222 (0%)

Query: 9   LVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTAG 68
           L++   +CK Y  G      L  V  ++  GE +AI+G SGSGKSTL+++LG LD PT+G
Sbjct: 5   LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64

Query: 69  RYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRRR 128
               +G P+  LS+   A +RNQK+GF++Q  +LL   +AL+NVA+PL+    K  +   
Sbjct: 65  DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124

Query: 129 RATELLTRVGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGAEI 188
           RA E+L  VGL  R +H+P++LSGG++QRVAIARAL+N P+++LADEPTG LD+++   I
Sbjct: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184

Query: 189 EALFNELHR-EGRTIIVVTHDNELAKRTKRIVTIRDGQVVSD 229
             L  EL+R +G   +VVTHD +LAKR  R + +RDG++ ++
Sbjct: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAE 226