Pairwise Alignments

Query, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., MacB family efflux pump subunit from Dickeya dianthicola ME23

 Score =  249 bits (635), Expect = 1e-70
 Identities = 123/227 (54%), Positives = 168/227 (74%)

Query: 7   APLVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPT 66
           APL+ L+++ + +T+G+  V  L  ++LTI  GE +AI+G SGSGKSTLMN+LGCLDKPT
Sbjct: 3   APLLALRRLHRRFTNGEQRVDVLKNINLTIHAGEMVAIIGASGSGKSTLMNILGCLDKPT 62

Query: 67  AGRYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDR 126
            G YQ+ G    +L+  QLAA+R +  GF+FQ ++LL   +  DNV +P VYAG    +R
Sbjct: 63  QGDYQVAGVSTLTLNADQLAALRREHFGFIFQRYHLLNDLNVGDNVEMPAVYAGQARHER 122

Query: 127 RRRATELLTRVGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGA 186
           RRRA  LL R+GLA+RL   P+QLSGGQ+QRV+IARALIN  Q++LADEPTGALDS SG 
Sbjct: 123 RRRAAALLARLGLAERLQDSPSQLSGGQQQRVSIARALINGGQVILADEPTGALDSVSGE 182

Query: 187 EIEALFNELHREGRTIIVVTHDNELAKRTKRIVTIRDGQVVSDEPTA 233
           E+ ++  ELH++G TI++VTHD+ +A+   RI+ I DG++V+D  TA
Sbjct: 183 EVLSILRELHQQGHTIVLVTHDSRIAQMAGRIIEIHDGEIVADRHTA 229