Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., Macrolide export ATP-binding/permease protein MacB from Xanthobacter sp. DMC5

 Score =  102 bits (253), Expect = 5e-26
 Identities = 97/413 (23%), Positives = 176/413 (42%), Gaps = 32/413 (7%)

Query: 11  MAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHG 70
           M A +LR  LT+L +      +  ++A+GEG R  ++  I +   N + +   +A +T G
Sbjct: 287 MNAHRLRTFLTMLGIIIGIASVVCVVALGEGSRQKVLANISSLGTNTLEI---FAGRTFG 343

Query: 71  RFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNK 130
               G+  +L   D+  LA    V    P+      + F    +  +   V   Y A   
Sbjct: 344 DTRSGKITTLVVADADALARQHYVAAVTPTVSKSTTVRFGGTEASALINGVGDGYFAAKG 403

Query: 131 LRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAH 190
           +RL  G R F+      +    V+       LF    G           P+G++  IG  
Sbjct: 404 VRLTQG-RLFDADSVRARTLEAVIDENTRKTLFADVPGG----------PLGKVILIGDV 452

Query: 191 EFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQ-RFHPNQAISGINLEPRVGSDRQALAA 249
              V+GV A   G    GS  + S + P+++ Q RF  + ++  I ++    +       
Sbjct: 453 FARVVGVAAPQQGGF--GSSQNLSVYLPYTSVQSRFVGSNSLRSITVKVADDAPMDVAEQ 510

Query: 250 TVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVASLGITN 309
            V + L +++    +D  I+   D    + ++      +   +  I  I+L V  +G+ N
Sbjct: 511 QVTRFLTQRHGT--KDFFIINTDD---IRNTITATTETMTVLIAAIAVISLIVGGIGVMN 565

Query: 310 VMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRLLAAIP 369
           +M  +V     +IGVRMAVGA  + I   +L ++++   +GG+ G+ +      L A   
Sbjct: 566 IMLVSVSERVGEIGVRMAVGARQSDILNQFLIEAVLVCLVGGVTGIALALGFGVLFAYSG 625

Query: 370 LQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQAL 422
                IY          S S I+  +V  +++G+   +LPA +A+++ P+ AL
Sbjct: 626 SNFTLIY----------SASSIIAAVVCSSLIGVGFGYLPARNASRLDPVTAL 668