Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 20/247 (8%)

Query: 181 VGQIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQAISGINLEPRV 240
           +G   +I  + F ++G+L      +      + S F P    +R +    I  + +    
Sbjct: 177 LGDRVRINDYLFLIVGILRSQPRAMLMPVQANESLFIPAEGMRRIYATPQIGNLIIRAAP 236

Query: 241 GSDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITL 300
           G D + +A  V   L+ +      D Q+       ++++S     L L      +G I+L
Sbjct: 237 GQDMERIAKNVAVALQPQLTDHDVDIQVPQQMIDGMTRQSRTFAYLLLA-----LGAISL 291

Query: 301 AVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAG--LGVT 358
               +G+ NVM   V    R+IG+RMA+GA    IR  +L +++    +G + G  LG+T
Sbjct: 292 VGGGVGVMNVMLMNVSERRREIGIRMALGARQRDIRNLFLLEAVTLTAVGALCGAVLGLT 351

Query: 359 FAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTP 418
            A              +Y  L      L+++ + + + +  ++G+     PA  A+++ P
Sbjct: 352 AAW-------------LYAWLSGWEFALAIAALPLGVGSTLLVGLFFGIYPAVSASRLQP 398

Query: 419 LQALQSE 425
           ++AL+ E
Sbjct: 399 VEALRDE 405