Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., Macrolide export ATP-binding/permease protein MacB from Variovorax sp. SCN45

 Score =  114 bits (286), Expect = 7e-30
 Identities = 99/422 (23%), Positives = 184/422 (43%), Gaps = 33/422 (7%)

Query: 5   RQIMQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGY 64
           R   + M A ++R +LT+L +      +  ++A+GEG +  ++  I+    N + V   Y
Sbjct: 280 RMAWRSMMAHRMRTALTMLGIIIGITSVVSIVAIGEGAKRFVLSDIKAIGTNTLDV---Y 336

Query: 65  ATQTHGRFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSE 124
                G        +LT  D   LAA P V    PS      + +           V   
Sbjct: 337 PGSDFGDDKAASIRTLTPSDLDALAAQPYVHSVTPSTSRNLRLRYRSVDINGSVNGVSDS 396

Query: 125 YQAMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQI 184
           +  +  +++  G   F   D   Q +VVV+      +LF   EG          DP+G+I
Sbjct: 397 FFRVRDIQMASGAA-FTASDVRHQSQVVVIDQNTRRKLF--PEGT---------DPLGKI 444

Query: 185 AKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTW-QRFHPNQAISGINLEPRVGSD 243
             +G    TVIGV  +      +   ++   + P+ST   R    Q    I +  R    
Sbjct: 445 ILVGNLPCTVIGVSQEKKNMFGENKSLNI--WLPYSTGASRLFGQQHFDSITVRIRDDQP 502

Query: 244 RQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVA 303
            +A   +V ++L  ++ +           D  +  K+ ++    L   L +I  I+L V 
Sbjct: 503 TKAAEDSVVKLLTMRHGSK---DFFTFNMDSIV--KTAERTSQSLTLLLSLIAVISLVVG 557

Query: 304 SLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVR 363
            +G+ N+M  +V   TR+IG+RMAVGA  + +   +L ++++   +GG+ G+ +++ +  
Sbjct: 558 GIGVMNIMLVSVTERTREIGIRMAVGARQSDVLQQFLTEAVLVCLVGGLIGVTLSYGISF 617

Query: 364 LLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQALQ 423
           L +    Q   I+          S+  +V   +  +++G++  +LPA +AA++ P++AL 
Sbjct: 618 LFSLFVKQWQMIF----------SMGAVVSAFLCASLIGVLFGYLPARNAARLDPIEALA 667

Query: 424 SE 425
            E
Sbjct: 668 RE 669