Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  133 bits (334), Expect = 1e-35
 Identities = 111/429 (25%), Positives = 195/429 (45%), Gaps = 35/429 (8%)

Query: 2   LPIRQIMQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVS 61
           L ++Q  Q + A +L+  L I A++W  + +  L+A+GEG       + +        V+
Sbjct: 3   LLLQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVA 62

Query: 62  GGYATQTHGRFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWM--MPY 119
            G  ++        + + LTE   + +A  P ++      E +E+     + + +  M  
Sbjct: 63  SGQTSEVWQGMPARRPIQLTESLMREVAQRPEIQRYSIVYENREVSITQQRGTAIGSMVS 122

Query: 120 AVKSEYQAMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQD 179
            V   Y ++  L+L  G R F+  D+   R+V +LG  +A                  Q 
Sbjct: 123 GVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAAT---------------SQL 167

Query: 180 PVGQIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQAISGINLEPR 239
            +G   KI    F VIG++   S     G   +   F P ST++     Q    + L P 
Sbjct: 168 KIGDEFKIRGIAFRVIGIMDDESSRFSFGD--NQKVFIPSSTFKDIWDTQPNMMLVL-PA 224

Query: 240 VGSDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFIT 299
            G    AL   ++    ++   S +DQ+ V + D       +   L  +Q+FL   G +T
Sbjct: 225 QGVSSWALREQLRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMT 284

Query: 300 LAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTF 359
           +AV  LG+ N+MF  V   TR+IGVR+A+GATP  I+  +L + L+ + +G + GL + +
Sbjct: 285 MAVGILGVANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAY 344

Query: 360 AMVRLLAAIPLQGNPIYDHLGQPV----PELSLSVIVIVIVTITVMGIVAAWLPANHAAK 415
             V LL           +HLG P     P ++ + + + ++  +++ + AA+ PA  AA+
Sbjct: 345 FGVLLL-----------NHLGLPTWLGEPVITSTTVWLSMLVTSILALAAAYFPARRAAQ 393

Query: 416 VTPLQALQS 424
           + P+ AL S
Sbjct: 394 LEPVIALSS 402