Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 838 a.a., ABC transporter, fused permease protein from Sphingobium sp. HT1-2

 Score = 47.0 bits (110), Expect = 2e-09
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 9/177 (5%)

Query: 181 VGQIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQAISGINLEPRV 240
           VG   + G  +FTV  ++A     + +G  +            R    Q  S    + R+
Sbjct: 154 VGDALRYGTADFTVAAIIADEPDRVGEGFTLGPVAIVSMDGLDRTGLIQPGSLYRAKYRL 213

Query: 241 GSDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITL 300
                A A  +++ L+++Y      +Q    +D   +     +F+  +  FL +IG   L
Sbjct: 214 RLPAGADAQALRERLEKRYV-----EQGWEFKDRERAAPGTNRFIENMGQFLSLIGLAAL 268

Query: 301 AVASLGITN--VMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGL 355
           A+A +G++N    +  +KR    +     +GAT   I+  YL Q  +  G+  +AGL
Sbjct: 269 AIAGIGVSNGVASYLAIKRGA--LATFKVLGATSADIQRIYLLQIGVVAGLAILAGL 323