Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 654 a.a., pyoverdine efflux carrier and ATP binding protein from Pseudomonas putida KT2440

 Score =  107 bits (266), Expect = 1e-27
 Identities = 97/420 (23%), Positives = 178/420 (42%), Gaps = 44/420 (10%)

Query: 11  MAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHG 70
           M   + R +LT+L +      +  +LAVGEG +  ++  +     N+++++G   T    
Sbjct: 274 MWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMAAFGSNILYLNGSPPTLRE- 332

Query: 71  RFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNK 130
                 A  +T  D   +  LP VKH +P    + ++   +           + +  +  
Sbjct: 333 -----PAGRITLDDVAAIGELPQVKHIMPVLGEKMMVRHGNNSQQFYVGGNNTFFPEIFN 387

Query: 131 LRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAH 190
              + G  +F   DE     V V+G ++  ++                +P+GQ   IG  
Sbjct: 388 WPAVEGS-FFTETDEASSAAVAVIGQKVREKMLAPGS-----------NPIGQYLLIGNV 435

Query: 191 EFTVIGVLA-KNSGNIEQGSPIDYSGFTPFSTWQ-RFHPNQAISGINLEPRVGSDRQALA 248
            F V+G+LA K + + +Q S  D     PFS    R   ++    I +  R     +   
Sbjct: 436 PFQVVGILAGKGASSGDQDS--DGRIVVPFSAAAIRLFGHRDPDYIAIAARDSGQVKDTE 493

Query: 249 ATVQQVLKRKYAASLQDQ---QIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVASL 305
           A + ++L++++      +      ++Q    +Q S       L   LG I  I+L V  +
Sbjct: 494 AAIDRLLRQRHQGKHDFELTNDAALIQAEARTQNS-------LSLMLGAIAAISLLVGGI 546

Query: 306 GITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRLL 365
           G+ N+M  TV+  TR+IG+RMA GA    I   +L+++++   +GG+ G+ +   +   L
Sbjct: 547 GVMNIMLMTVRERTREIGIRMATGARQRDILRQFLSEAIMLSMVGGLTGIALALVVGASL 606

Query: 366 AAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQALQSE 425
                        L       +L  IV       + G+V  ++PA  AA++ P++AL SE
Sbjct: 607 T------------LADIAVAFALPAIVGAFACAVITGVVFGFMPARKAARLDPVKALTSE 654