Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  101 bits (251), Expect = 8e-26
 Identities = 96/416 (23%), Positives = 175/416 (42%), Gaps = 33/416 (7%)

Query: 11  MAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHG 70
           MAA K+R  LT+L +      +  ++ VG+  +  ++  I+    N I +  G   +  G
Sbjct: 265 MAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPG---KDFG 321

Query: 71  RFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNK 130
             +     +L   D   +   P V  A PS      + + +    +    V  +Y  +  
Sbjct: 322 DDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYG 381

Query: 131 LRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAH 190
           +    G   FN V +  + +VVVL      QLF  +            + VG++   G  
Sbjct: 382 MSFREGNT-FNAVQQQDRAQVVVLDANTRRQLFPNKA-----------NVVGEVVLAGNM 429

Query: 191 EFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQ-RFHPNQAISGINLEPRVGSDRQALAA 249
              VIGV  +        + +    + P+ST   R      ++ I +  + G D      
Sbjct: 430 PVIVIGVAEEKPSMYGNSNLLQV--WLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQ 487

Query: 250 TVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVASLGITN 309
            + ++L  ++    +        D  L  K+ ++    LQ FL ++  I+L V  +G+ N
Sbjct: 488 QLTRLLTLRHG---KKDFFTWNMDSVL--KTAEKTTYTLQLFLTLVAVISLVVGGIGVMN 542

Query: 310 VMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRLLAAIP 369
           +M  +V   TR+IG+RMAVGA  + +   +L ++++   +GG  G+ ++   +  +  + 
Sbjct: 543 IMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSM-FIAFMLQLF 601

Query: 370 LQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQALQSE 425
           L G  I           SL+ +    +  T  GI+  WLPA +AA++ P+ AL  E
Sbjct: 602 LPGWEI---------GFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE 648