Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component (NCBI) from Escherichia coli BW25113

 Score =  102 bits (253), Expect = 5e-26
 Identities = 104/418 (24%), Positives = 180/418 (43%), Gaps = 37/418 (8%)

Query: 11  MAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHG 70
           +AA K+R  LT+L +      +  ++ VG+  +  ++  I++   N I V   Y  +  G
Sbjct: 265 LAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDV---YPGKDFG 321

Query: 71  RFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNK 130
                   +L   D   +   P V  A P+      + + +         V  +Y  +  
Sbjct: 322 DDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYG 381

Query: 131 LRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAH 190
           +    G   FN      + +VVVL      QLF  +            D VG++  +G  
Sbjct: 382 MTFSEGNT-FNQEQLNGRAQVVVLDSNTRRQLFPHKA-----------DVVGEVILVGNM 429

Query: 191 EFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQ-RFHPNQAISGINLEPRVGSDRQALAA 249
              VIGV  +       GS      + P+ST   R      ++ I +  + G D      
Sbjct: 430 PARVIGVAEEKQSMF--GSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQ 487

Query: 250 TVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVASLGITN 309
            + ++L  ++    +        D  L  K++++    LQ FL ++  I+L V  +G+ N
Sbjct: 488 QLTRLLSLRHG---KKDFFTWNMDGVL--KTVEKTTRTLQLFLTLVAVISLVVGGIGVMN 542

Query: 310 VMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRLLAAIP 369
           +M  +V   TR+IG+RMAVGA  + +   +L ++++   +GG   LG+T +   LL A  
Sbjct: 543 IMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGG--ALGITLS---LLIAFT 597

Query: 370 LQGNPIYDHLGQPVPELSLSVIVIVIVTI--TVMGIVAAWLPANHAAKVTPLQALQSE 425
           LQ       L  P  E+  S + +++  +  TV GI+  WLPA +AA++ P+ AL  E
Sbjct: 598 LQ-------LFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE 648