Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Enterobacter asburiae PDN3

 Score = 98.6 bits (244), Expect = 5e-25
 Identities = 100/418 (23%), Positives = 176/418 (42%), Gaps = 37/418 (8%)

Query: 11  MAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHG 70
           MAA K+R  LT+L +      +  ++ VG+  +  ++  I+    N I V   Y  +  G
Sbjct: 263 MAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDV---YPGKDFG 319

Query: 71  RFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNK 130
                   +L   D   +   P V  A P+      +   +         V  +Y  +  
Sbjct: 320 DDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRLRVGNVDVAASANGVSGDYFNVYG 379

Query: 131 LRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAH 190
           +    G   FN      + +VVVL      QLF  +            + VG++  +G  
Sbjct: 380 MTFSEGAT-FNAEQLAGRAQVVVLDANSRRQLFPNKA-----------NVVGEVILVGNM 427

Query: 191 EFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQ-RFHPNQAISGINLEPRVGSDRQALAA 249
             TVIGV  +       GS      + P++T   R      ++ I +  + G D      
Sbjct: 428 PATVIGVAEEKQSMF--GSSKILRVWLPYTTISGRIMGQSWLNSITVRVKEGYDSALAEQ 485

Query: 250 TVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVASLGITN 309
            ++++L  ++    +        D  L  K+ ++    LQ FL ++  I+L V  +G+ N
Sbjct: 486 QLERLLTLRHG---KKDFFTWNMDGLL--KTAEKTTRTLQLFLTLVAVISLVVGGIGVMN 540

Query: 310 VMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRLLAAIP 369
           +M  +V   TR+IG+RMAVGA  + +   +L ++++   +GG  G+ ++     ++ A  
Sbjct: 541 IMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGAMGIALS-----MMIAFA 595

Query: 370 LQGNPIYDHLGQPVPELSLSVIVIVIVTI--TVMGIVAAWLPANHAAKVTPLQALQSE 425
           LQ       L  P  E+  S + I+   +  T  GI+  WLPA +AA++ P+ AL  E
Sbjct: 596 LQ-------LFLPGWEIGFSPVAIITAFLCSTFTGILFGWLPARNAARLDPVDALARE 646