Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score = 77.8 bits (190), Expect = 5e-19
 Identities = 94/412 (22%), Positives = 172/412 (41%), Gaps = 40/412 (9%)

Query: 17  RLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHGRFHEGQ 76
           R  L +L +      +  LL +G    +  +R  ++   +++        +T+ R     
Sbjct: 15  RAVLALLGITVGCAAVVALLNIGHNAAADAIRAFRDMGSDMLVAGFDDTAETNQR----- 69

Query: 77  ALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNKLRLLPG 136
            +  T     +  ALP ++HA P            ++   +     +E   +  L++  G
Sbjct: 70  RVPATLDIDALTRALPGIRHAAPLILTSTNARLHRRQFNAIVAGAGAELAQVLALQVAHG 129

Query: 137 GRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAHEFTVIG 196
            R+    D  +Q    VLG + AV+L          G       +G   ++  + F V+G
Sbjct: 130 -RFLTRYD--RQSTYAVLGAKTAVEL----------GEAGTPATLGSRIQLRGYLFEVVG 176

Query: 197 VLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQAISGINLEPRVGSDRQALAATVQQVLK 256
           +L +   N     P+D +   P     R  P+  IS +     V   R++     +    
Sbjct: 177 ILKEQGQNPLLPVPVDEAIILPIEGMHRLLPSPEISSV-----VARSRRSETLPQEAAAL 231

Query: 257 RKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSF---LGIIGFITLAVASLGITNVMFA 313
           R Y  +L   + V VQ   LSQ+ ++    + ++F   L  +G I+L +  +G+ NVM  
Sbjct: 232 RDYLMALAPGREVSVQ---LSQQLLEGMARQSRTFTWLLAGLGGISLLMGGVGVMNVMVM 288

Query: 314 TVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRLLAAIPLQGN 373
            V    R+IGVRMA+GA P  I   +L ++      G +AG     A+V LL A      
Sbjct: 289 NVAGRRREIGVRMALGARPKDIGRLFLLEAAALAIAGALAG-----AIVGLLTAW----- 338

Query: 374 PIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQALQSE 425
            ++  +   +  LS   + + I++   +G+     PA  AA++ P++AL+ +
Sbjct: 339 -LFVKMSGWIFSLSPLSLPLGIISSLAVGVFFGLHPALTAARLEPVKALRDD 389