Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., ABC-type antimicrobial peptide transport system, permease component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 71.6 bits (174), Expect = 5e-17
 Identities = 93/459 (20%), Positives = 181/459 (39%), Gaps = 60/459 (13%)

Query: 8   MQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVS------ 61
           ++ + A +LR  LT L + +    +  ++A+G G +  I+  I+    N I +       
Sbjct: 14  LEAVMANRLRSLLTALGIIFGVAAVIAMMAIGNGAQQEILEQIKLVGVNNIIIEPVVEQV 73

Query: 62  --------GGYATQTHGRFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKR 113
                   GG       +F  G  +   E   +V+   P ++   P       I  +  R
Sbjct: 74  EEEVQDGPGGGPGAEKNKFSPGLRMLDVEAIQEVI---PGIQRISPEVIMDTHIVKSGVR 130

Query: 114 SWMMPYAVKSEYQAMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEG----- 168
                  V  EY  +   +L  GG  F   +      V ++G  +  + F+++       
Sbjct: 131 RSAKLVGVTPEYFKVTNFKLREGGM-FTENNLLNGDPVCIIGRGVQTKFFSKENAIGKRI 189

Query: 169 ----DWFSG-GELEQDPVGQ--IAKIGAHEFTV--------IGVLAKNSGNIEQGSPID- 212
                W    G LE+  V    +AK+G  +F +        + V  KN   +  GS +  
Sbjct: 190 KCGNQWMRVIGILEERIVSDKSLAKLGIRDFNMDVYIPMQTMLVRYKNRDMVTSGSLVSG 249

Query: 213 ------YSGFTPFSTWQRFHPNQAISGINLEPRVGSDRQALAATVQQVLKRKYAASLQDQ 266
                  +G    +T  +      I  + ++    S     A  + ++L+RK+   +  +
Sbjct: 250 RQGVVIINGEVQQNTSNKQTNYHQIDKLVVQVEESSMLNPTAEVLSRLLERKHYNVIDFE 309

Query: 267 QIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVASLGITNVMFATVKRATRDIGVRM 326
             + + +  L Q+   Q +  +   LG I  I+L V  +GI N+M A+V    ++IG+R+
Sbjct: 310 --ITIPELLLKQQQRTQNIFNI--VLGAIAGISLLVGGIGIMNIMLASVMERIKEIGLRL 365

Query: 327 AVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRLLAAIPLQGNPIYDHLGQPVPEL 386
           A+GA    I   +L ++++    GGI G+ +   +  L++             G     +
Sbjct: 366 ALGAQKTDIVHQFLFEAMMISVTGGIIGVILGIILASLVS-----------QFGDFPTII 414

Query: 387 SLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQALQSE 425
           ++  I++       +G++    PA  AA   P+ +L+ E
Sbjct: 415 TIPSILVSFSVAATVGLIFGIAPAKRAASQDPITSLRHE 453