Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., ABC-type antimicrobial peptide transport system, permease component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 71/295 (24%), Positives = 131/295 (44%), Gaps = 35/295 (11%)

Query: 137 GRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAHEFTVIG 196
           GR+F  ++ T  R V VLG ++A  LF             E D +G+  KI   +F VIG
Sbjct: 148 GRFFTELEITAARNVTVLGAKIANALFP------------EGDAIGKEMKIKGQKFMVIG 195

Query: 197 VLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQAISGINLEPRVG-----SDRQALAATV 251
           +L +    +      D +   PF ++ + +    +    +EP +      SDR  +A   
Sbjct: 196 LLEEEGEGLFDLPSKDDACLIPFGSFGKMY---YLGRWGIEPTIAAKGMDSDRGLIALEN 252

Query: 252 QQ--VLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVASLGITN 309
           +   +L+ K      ++    +      Q ++      +     +IG  ++ V   GI N
Sbjct: 253 EMTGLLRGKRGLKPTEEDDFALNKSEFIQNAIGAIFDVISIAGAVIGGFSILVGGFGIAN 312

Query: 310 VMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRLLAAIP 369
           +MF +V+  T  IG++ ++GA    I   +L +S      GG+ GL + FA    +  IP
Sbjct: 313 IMFVSVRERTNIIGIQKSLGAKNYFILLQFLFESTFLSLFGGLTGLVLVFA----ITFIP 368

Query: 370 LQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQALQS 424
           L    I+         +S   + + I    V+G+++  +PA  AA++ P++A+++
Sbjct: 369 LGSLEIF---------MSAKNMALGIGLSMVIGMLSGVVPAGIAARMDPVEAIRT 414