Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., ABC transporter permease from Cellulophaga baltica 18

 Score =  110 bits (275), Expect = 8e-29
 Identities = 96/427 (22%), Positives = 189/427 (44%), Gaps = 26/427 (6%)

Query: 6   QIMQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYA 65
           ++   +    LR  LT L V ++ + +  LL    G+ +G  R       N + V G   
Sbjct: 11  EVFSTLTKNMLRTVLTTLGVIFAIIILILLLGSATGMINGFDRIFAGKASNSLFVWGQET 70

Query: 66  TQTHGRFHEGQALSLTEQDSQVLAA----LPMVKHALPSAEWQELITFA--DKRSWMMPY 119
           +  +  F  G+ +     D  +L+     + ++   +    +Q+ +      + S    +
Sbjct: 71  SMPYKGFERGRPVEYEMDDITMLSKRVEEVDVISPRIELGGFQQAVVVKREGRTSGSRVF 130

Query: 120 AVKSEYQAMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQD 179
              S    +NK +++ G R+ N  D    +KV V+G +    LF++              
Sbjct: 131 GDFSTIDLVNKKKIVEG-RFINLNDVNNGKKVCVIGLETYELLFDKGIS----------- 178

Query: 180 PVGQIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQR-FHPNQAISGINLEP 238
            +G+   I    FTVIGV  K SG+ +     + S   PF+T+QR F+  + +  + +  
Sbjct: 179 AIGKDISINNIYFTVIGVYEK-SGDFDFDG--ENSVIIPFTTFQRSFNSGERVGWMAILI 235

Query: 239 RVGSDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFI 298
           +         A ++++LK KY     D + +   D      ++  F + LQ F   +G  
Sbjct: 236 KPEYPVAQAEAKIKELLKVKYDIHPDDNRAIGSFDFSQIFTAISAFTMVLQGFAFFVGIF 295

Query: 299 TLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVT 358
           T+    + ++N++  TVK  T++IGVR A+GATP  I+   + +S++   + G  G  + 
Sbjct: 296 TMLAGVIAVSNILLITVKERTKEIGVRRALGATPKVIKRQIILESIVLTVVAGAVGFIIA 355

Query: 359 FAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTP 418
              + +L  +    N     +    P +SL+ I++    +T++ I+   +PA  A ++ P
Sbjct: 356 VGFLYIL-NVQTASNTDVPFVN---PTVSLTQILVSFTLMTLLSILIGLIPARRAVRIKP 411

Query: 419 LQALQSE 425
           ++AL+ +
Sbjct: 412 IEALRED 418