Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., ABC transporter permease from Cellulophaga baltica 18

 Score =  119 bits (299), Expect = 1e-31
 Identities = 103/437 (23%), Positives = 195/437 (44%), Gaps = 41/437 (9%)

Query: 5   RQIMQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHV---- 60
           ++I++ + +   R  LT   V W  L +  LLA G+G+ +GI     +   N + +    
Sbjct: 8   KEIIEVLTSNMFRTILTAFGVFWGILILIILLAAGKGLENGIKSDFGDIATNTMFMWSQA 67

Query: 61  -SGGYATQTHGR---FHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWM 116
            S  Y     GR   F      SL E   ++       ++ L   + +  +T   K    
Sbjct: 68  TSKEYEGLPKGRRFDFKVSDVTSLKENIKEL--RFVSARNRLDGYQGENNVTRGIKVGAF 125

Query: 117 MPYAVKSEYQAMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGEL 176
             Y    E    + +  +  GR+ N  D  ++RK+ ++G  +   LF++ E         
Sbjct: 126 NVYGDYPEIIKQDPM-TITSGRFINHSDIVEKRKIAIIGQGVKSSLFDKGE--------- 175

Query: 177 EQDPVGQIAKIGAHEFTVIGVLAK--NSGNIEQGSPIDYSGFTPFSTWQRFHPNQAISGI 234
               +G   K+    F V+G   K  N G+ E+G    +  FT FS  Q F+    +  +
Sbjct: 176 --SVLGSFIKVQGVNFMVVGTYKKKSNEGDGEEGQKEIFVPFTSFS--QAFNKGNDVGWM 231

Query: 235 NLEPRVGSDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGI 294
            +  + GS   +L   +  ++K       +D + +   D +     ++   + ++     
Sbjct: 232 AITAKDGSSITSLKERIITLMKVNRKIHPEDNRAIGNFDLYEQYNRVESLFVAMRLIAYF 291

Query: 295 IGFITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAG 354
           +G + L    +G++N+M   VK  T++IG+R A+G  P +I+   L +S+    + G+AG
Sbjct: 292 VGILVLISGIIGVSNIMLIVVKERTKEIGIRRALGEDPWSIKVQILLESIFLTIISGMAG 351

Query: 355 LGVTFAMVRLLAAIPLQG-NPIYDHLGQPV-----PELSLSVIVIVIVTITVMGIVAAWL 408
           +        +  A+ + G N + D +G PV     P +SL V++I ++ + + G++A ++
Sbjct: 352 I--------IFGALFIFGINSLLDAVG-PVDMFVNPSVSLGVVLIALIILIISGLLAGFI 402

Query: 409 PANHAAKVTPLQALQSE 425
           PA  A KV P+ AL++E
Sbjct: 403 PAQSAIKVKPIDALRAE 419