Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., efflux ABC transporter, permease protein from Bacteroides ovatus ATCC 8483

 Score =  109 bits (273), Expect = 1e-28
 Identities = 94/423 (22%), Positives = 186/423 (43%), Gaps = 22/423 (5%)

Query: 6   QIMQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYA 65
           +I+  +   K R  LT   V W    +  L+  G+G+   + +  +    N   +     
Sbjct: 10  EILITITRNKTRSLLTAFGVFWGIFMLVALIGGGQGLEDMMKKNFEGFATNSGFLVSQRT 69

Query: 66  TQTHGRFHEGQALSLTEQD-SQVLAALPMVKHALPS-AEWQELITFADKRSWMMPYAVKS 123
            + +  F +G+  +L   D  ++ + +  V+   PS A W     + DK+       +  
Sbjct: 70  GEAYKGFRKGRWWNLESTDIDRLRSQVKEVEIITPSVARWGSKAVYEDKKYDCSVKGLYP 129

Query: 124 EYQAMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQ 183
           +Y  +    +  G R+ N VD  + RKV V+G ++   LF   E           DP G+
Sbjct: 130 DYLHIESQEMAYG-RFINEVDIKEARKVCVIGKRIYESLFKPGE-----------DPCGK 177

Query: 184 IAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQR-FHPNQAISGINLEPRVGS 242
             ++    + VIG ++ + G++        +   PF+T Q+ ++    I  I    + G 
Sbjct: 178 YVRVDGIYYQVIG-MSSSEGDMNIQGRASEAVTLPFTTMQQTYNLGGRIDVICFTAKHGV 236

Query: 243 DRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAV 302
               +   ++QV+K  +  S  D+Q VM  +       +      +   + ++G  TL  
Sbjct: 237 KVSEIQPKMEQVIKAAHYISPDDKQAVMCLNAEAMFSMVDNLFTGINILVWMVGLGTLLA 296

Query: 303 ASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMV 362
            ++G++N+M  TVK  T +IG+R A+GA P  I    L++S++   + G+   G++FA V
Sbjct: 297 GAIGVSNIMMVTVKERTTEIGIRRAIGARPKDILQQILSESMVLTTIAGMC--GISFA-V 353

Query: 363 RLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQAL 422
            +L  + +  N      G    +++  + +     +  +G++A   PA  A  + P++A+
Sbjct: 354 MVLQLVEMGANA---DGGDTRFQVTFGLAIGTCALLIALGMLAGLAPAYRAMAIKPIEAI 410

Query: 423 QSE 425
           + E
Sbjct: 411 RDE 413