Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., Macrolide export ATP-binding/permease protein MacB from Azospirillum sp. SherDot2

 Score =  141 bits (356), Expect = 3e-38
 Identities = 114/429 (26%), Positives = 191/429 (44%), Gaps = 32/429 (7%)

Query: 4   IRQIMQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGG 63
           +R  +  + A  LR +LT+L +      +  ++AVG G R  ++R I +   NLI V  G
Sbjct: 7   LRAALDSLRANPLRSALTMLGIVIGVAAVIAMVAVGAGARDQVLRQIASLGTNLIMVGQG 66

Query: 64  YATQTHGRFHEGQALSLTEQDS-QVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVK 122
              +   +   G A SLTE D+  VL+ +P V    PS  W   I   ++    + + + 
Sbjct: 67  SIARGGVKLGAGTASSLTEDDALAVLSEIPGVVVTAPSVRWGLQIVAGNQNWGTVLFGIT 126

Query: 123 SEYQAMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVG 182
            +Y       +  G R  +  D  Q  KVVVLG  +   LF         GG    DP+G
Sbjct: 127 PDYMDARDWNVATG-RGLSDEDVAQANKVVVLGQTVVRNLFG--------GG----DPIG 173

Query: 183 QIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQAISG------INL 236
           +  ++ +   TV+GVLA+   N  QG   D   F P ST +R  P  A S       + +
Sbjct: 174 EPVRVFSTPLTVVGVLAEKGQNT-QGQDQDDVIFVPLSTAKRNIPGMAKSNPRFIHTMVV 232

Query: 237 EPRVGSDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIG 296
           + R G+D     A ++ +L++++           ++D      +       L   L  + 
Sbjct: 233 KMRDGTDMAEAQAQIRDLLRQRHRLVAGQDDDFWMRDLSEVSATRDASSRALSFLLAAVA 292

Query: 297 FITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLG 356
            ++L V  +GI N+M  +V   TR+IG+R+A+GA    I   +L +S     +G  A +G
Sbjct: 293 AVSLLVGGIGIMNIMLVSVTERTREIGLRLAIGARRRDILVQFLIESTTLSLIG--AAVG 350

Query: 357 VTFAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKV 416
           V   +   +    L G P           + +  +V+ +V   ++G+     PA  AA++
Sbjct: 351 VALGIGTAMGVAALAGWPTL---------IQIDSVVLAVVVSGIVGVFFGLYPARRAARL 401

Query: 417 TPLQALQSE 425
            P++AL+ E
Sbjct: 402 NPIEALRHE 410