Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., ABC transporter nucleotide binding/ATPase from Agrobacterium fabrum C58

 Score =  105 bits (262), Expect = 4e-27
 Identities = 100/419 (23%), Positives = 185/419 (44%), Gaps = 49/419 (11%)

Query: 13  AEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHGRF 72
           A K+R  LT+L +      +A + A+G G +  I+ +I +   N I V  G   +  G  
Sbjct: 267 AHKMRSLLTMLGIIIGIASVAAISALGAGSQQQILSSISSLGTNTIEVRAG---KGFGDL 323

Query: 73  HEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNKLR 132
             G+  +L   D++ L   P V    P+      +  A          V +++  +  L 
Sbjct: 324 EAGKIRTLVPADAEALVNQPYVDSVTPTVTTSVTVKRAAVAVNASVTGVGADFFRVRGLE 383

Query: 133 LLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAHEF 192
           L  G + F+  D     + VV+    A  LF  +            +PVGQ+  +G    
Sbjct: 384 LAHG-QLFDAQDVIAYSQNVVIDASAARDLFPDRV-----------NPVGQVILLGTMPA 431

Query: 193 TVIGVLAKNSGNIEQGSPID----YSGFTPFSTWQRFHPNQAISGINLEPRVGSDRQALA 248
            V+GV  + +     G  +D    Y+ +T         PN  + GI +  R   D   + 
Sbjct: 432 RVVGVTKRENSF---GPAVDTLTVYAPYTTVMGRMLGRPN--VDGITVRIRDDVDPGNVE 486

Query: 249 ATVQQVLKRKYAASLQDQQIVMVQDHFLS-----QKSMQQFLLRLQSFLGIIGFITLAVA 303
           A V ++++R++ A          +D FL+     +++++     L   +  +  I+L V 
Sbjct: 487 AAVTRLIERRHGA----------KDFFLTNSATIRETIETTTQTLTLLISSVAVISLIVG 536

Query: 304 SLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVR 363
            +G+ N+M  +V   T++IGVR+AVGA  + I   +L ++++   +GG+ G+ +   +  
Sbjct: 537 GIGVMNIMLVSVTERTKEIGVRVAVGARRSDILSQFLIEAVMVCLVGGLMGIMLALGISA 596

Query: 364 LLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQAL 422
           L   +    +P +  +  P        I++     T++GIV  +LPA +AAK+ P++AL
Sbjct: 597 LFNLL----SPDFKMIFSP------GSIIVAFACSTLIGIVFGFLPARNAAKLDPIEAL 645