Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., Macrolide export ATP-binding/permease protein MacB from Xanthobacter sp. DMC5

 Score =  123 bits (309), Expect = 1e-32
 Identities = 104/400 (26%), Positives = 190/400 (47%), Gaps = 31/400 (7%)

Query: 14  AHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASGQT-SEVWQG 72
           AHRL++ L +  I  G+ SVV ++ALGEG  +    +   L   T  + +G+T  +   G
Sbjct: 289 AHRLRTFLTMLGIIIGIASVVCVVALGEGSRQKVLANISSLGTNTLEIFAGRTFGDTRSG 348

Query: 73  MPARRPIQLTESLMRE---VAQRPEIQRYSIVYENREVSITQQRGTAIGSMVSGVDRGYF 129
                 +   ++L R+    A  P + + + V         +  GT   ++++GV  GYF
Sbjct: 349 KITTLVVADADALARQHYVAAVTPTVSKSTTV---------RFGGTEASALINGVGDGYF 399

Query: 130 SLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAATSQLKI-----GDEFKIRGIAFRVIG 184
           +  G++LT G R F           A++ ++   T    +     G    I  +  RV+G
Sbjct: 400 AAKGVRLTQG-RLFDADSVRARTLEAVIDENTRKTLFADVPGGPLGKVILIGDVFARVVG 458

Query: 185 IMDDESSRFSFGDNQKVFIPSSTFKD--IWDTQPNMMLVLPAQGVSSWALREQLRHTFAQ 242
           +   +   F    N  V++P ++ +   +       + V  A         +Q+     Q
Sbjct: 459 VAAPQQGGFGSSQNLSVYLPYTSVQSRFVGSNSLRSITVKVADDAPMDVAEQQVTRFLTQ 518

Query: 243 RLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMTMAVGILGVANMMFLAVTE 302
           R        +  F+ +       ITA    +   +AA  ++++ VG +GV N+M ++V+E
Sbjct: 519 R-----HGTKDFFIINTDDIRNTITATTETMTVLIAAIAVISLIVGGIGVMNIMLVSVSE 573

Query: 303 RTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAY-FGVLLLNHLGLPTWLGE 361
           R  EIGVR+A+GA    I  QFL+E +L+ ++G + G+ LA  FGVL   + G    L  
Sbjct: 574 RVGEIGVRMAVGARQSDILNQFLIEAVLVCLVGGVTGIALALGFGVLFA-YSGSNFTL-- 630

Query: 362 PVITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIALS 401
            + +++++  +++ +S++ +   Y PAR A++L+PV AL+
Sbjct: 631 -IYSASSIIAAVVCSSLIGVGFGYLPARNASRLDPVTALA 669