Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., macrolide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  107 bits (266), Expect = 1e-27
 Identities = 111/419 (26%), Positives = 191/419 (45%), Gaps = 53/419 (12%)

Query: 5   LQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASG 64
           +Q +W+ +  +R ++ L +  I  GV SVV+++A+GEG  R             QM A G
Sbjct: 269 VQAAWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVM---------AQMGAFG 319

Query: 65  QTSEVWQGMPA--RRPIQL-TESLMREVAQRPEIQRYSIVYENREVSITQQRGTAIGSMV 121
                  G     R P+ + T   +  +A  P++QR   V    EV +       + + V
Sbjct: 320 SNIIYLSGTSPNPRTPLGIVTLDDVHALAALPQVQRIMPV-NGSEVGVRFSNVDYM-AYV 377

Query: 122 SGVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAAT----SQLKIGDEFKIRG 177
            G D  +  +    +  G+  F+  D+     VA++G  V           IG    I  
Sbjct: 378 GGNDTNFPEIFNWPVVEGNY-FTAADERAAATVAVIGHRVREKLFKGEVNPIGQYILIEN 436

Query: 178 IAFRVIGIMDDESSRFSFGDNQ-KVFIP--SSTFKDIWDTQPNMMLVLPAQGVSSWALRE 234
           + F+VIG++ ++ +     D+  +V IP  +++ +   +  P  +++  A          
Sbjct: 437 VPFQVIGVLAEKGAASGNKDSDDRVAIPYTAASVRLFGNYNPEYVVIAAADA-------R 489

Query: 235 QLRHT------FAQRLHFSPEDQEAVFLPDFGSGVAVITAILRG---IQAFLAASGMMTM 285
           ++R T        Q+LH    D E        +  A+I A  R    +   L +   +++
Sbjct: 490 KVRETEVAIDQLMQKLHNGKRDYELT------NNAAMIQAEARTQNTLSLMLGSIAAISL 543

Query: 286 AVGILGVANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAYF 345
            VG +GV N+M + V ERTREIG+R+A GA  + I +QFL E ++L V+G L G+ LA  
Sbjct: 544 LVGGIGVMNIMLMTVRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLCGIALALL 603

Query: 346 --GVLLLNHLGLPTWLGEPVITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIALSS 402
             GVL+L  + +         +   V+ +     +  +   + PAR+AA+L+PV AL+S
Sbjct: 604 VGGVLVLAKVAVQ-------FSLLAVFGAFGCALVTGVVFGFMPARKAARLDPVKALTS 655