Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component (NCBI) from Escherichia coli BW25113

 Score =  122 bits (306), Expect = 3e-32
 Identities = 100/408 (24%), Positives = 190/408 (46%), Gaps = 30/408 (7%)

Query: 5   LQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASG 64
           L  +W+ L A++++++L +  I  G+ SVV ++ +G+   +      R +   T  V  G
Sbjct: 258 LTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPG 317

Query: 65  QT-----SEVWQGMPARRPIQLTESLMREVAQRPEIQRYSIVYENREVSITQQRGTAIGS 119
           +       +  Q +     I + +      A     Q   + Y N +V+ +         
Sbjct: 318 KDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAAS--------- 368

Query: 120 MVSGVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAAT----SQLKIGDEFKI 175
             +GV   YF++ G+  + G+  F+    +   +V +L  +            +G+   +
Sbjct: 369 -ANGVSGDYFNVYGMTFSEGNT-FNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILV 426

Query: 176 RGIAFRVIGIMDDESSRFSFGDNQKVFIPSSTFKD--IWDTQPNMMLVLPAQGVSSWALR 233
             +  RVIG+ +++ S F      +V++P ST     +  +  N + V   +G  S    
Sbjct: 427 GNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAE 486

Query: 234 EQLRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMTMAVGILGVA 293
           +QL    + R       ++  F  +    +  +    R +Q FL    ++++ VG +GV 
Sbjct: 487 QQLTRLLSLR-----HGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVM 541

Query: 294 NMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAYFGVLLLNHL 353
           N+M ++VTERTREIG+R+A+GA    + QQFL+E +L+ ++G  +G+ L+      L  L
Sbjct: 542 NIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTL-QL 600

Query: 354 GLPTWLGEPVITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIALS 401
            LP W  E   +   + L+ L +++  +   + PAR AA+L+PV AL+
Sbjct: 601 FLPGW--EIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALA 646