Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., MacB family efflux pump subunit from Dickeya dianthicola ME23

 Score =  116 bits (291), Expect = 2e-30
 Identities = 101/406 (24%), Positives = 191/406 (47%), Gaps = 39/406 (9%)

Query: 10  QTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASGQTSEV 69
           + + A R+++ L +  I  G+ SVV ++ALG+G  +   E    +   T  + SG+    
Sbjct: 264 RAMSAQRIRTFLTMLGIIIGIASVVSVVALGKGSQQQMLEHINAMGTSTLEIFSGKD--- 320

Query: 70  WQGMPARRPIQLTESLMREVAQRPEIQRYSIVYENREVSITQQRGTAIGSMVSGVDRGYF 129
           +  M +     L  + +R + Q+P I  +S+       +  +    A+   VSGV   +F
Sbjct: 321 FGDMHSAAIQTLRVNDLRPLEQQPYI--HSVTPTVSTSATLRYANKAVSVSVSGVGEQFF 378

Query: 130 SLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVA----ATSQLKIGDEFKIRGIAFRVIGI 185
           ++ G  L+ G+  FS        + A++  +         +  +G    +  +  R+IG+
Sbjct: 379 TVRGYVLSEGN-GFSPLSVERLTQEAVIDQNTRNKLFPNGENPLGQVIFLGQLPCRIIGV 437

Query: 186 MDDESSRFSFGDNQKVFIPSSTFKDIWDTQP-----------NMMLVLPAQGVSSWALRE 234
              + S F   +N  V++P +T       Q            N+ L +  QG++    R+
Sbjct: 438 ATRKQSGFGSDENLNVWVPYTTVMRRMVGQSYLRSITVRVKDNIDLSVAQQGITQILTRQ 497

Query: 235 QLRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMTMAVGILGVAN 294
                F              F+ +  S    I      +   ++A  ++++ VG +GV N
Sbjct: 498 HGNKDF--------------FVMNTDSIRQTIRQTTATMTLLVSAIALISLIVGGIGVMN 543

Query: 295 MMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAYFGVLLLNHLG 354
           +M ++VTERTREIGVR+A+GA    I QQFL+E +L+ + G ++G++L+     + + + 
Sbjct: 544 IMLVSVTERTREIGVRMAVGARTGDIMQQFLIEAVLVCLCGGILGVILSLLAGAIASRIS 603

Query: 355 LPTWLGEPVITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIAL 400
             T+    V ++  + L+   +S++ +   +FPARRAA+L+P+ AL
Sbjct: 604 GVTF----VYSAPVMALAFFCSSLIGVIFGFFPARRAARLQPIHAL 645



 Score = 24.6 bits (52), Expect = 0.009
 Identities = 12/58 (20%), Positives = 29/58 (50%)

Query: 1   MRLLLQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQET 58
           MR ++ QS+   +  R+K  + ++    G+  ++      + F+   T+S R  +++T
Sbjct: 461 MRRMVGQSYLRSITVRVKDNIDLSVAQQGITQILTRQHGNKDFFVMNTDSIRQTIRQT 518