Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., ABC-type antimicrobial peptide transport system, permease component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 102/430 (23%), Positives = 199/430 (46%), Gaps = 59/430 (13%)

Query: 5   LQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASG 64
           ++++ +++ ++RL+++L    I+ G+ ++V ++   +G      ESF  L      V S 
Sbjct: 7   IKEALRSIKSNRLRTILTGLIIAIGITALVGMLTAIDGMKAQIEESFSGLGANNFDVRSK 66

Query: 65  QTSEVWQGMPARRPIQLTESLMREVAQRPEIQRYSIVYENREVSITQ---------QRGT 115
            TS    G    R   +TE   + V+ +  +  +   Y +R ++            +RG+
Sbjct: 67  NTS----GQRVTRS-GVTEKQFKPVSYKDALD-FRKGYSSRGMATVSTRVSGSTEVKRGS 120

Query: 116 AIGS---MVSGVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAA----TSQLK 168
            I +    + GVD  Y  + G  +  G R+FS  +      V ++G  +      + +  
Sbjct: 121 EITNPNVRIIGVDENYVLIKGQNIEEG-RNFSNVEIEYGNNVCLIGSEIVELLFKSHENP 179

Query: 169 IGDEFKIRGIAFRVIGIMDDESSRFS-FGDNQKVFIPSSTFKDI------WDT------Q 215
           +G      G  + ++G+++++ S  +  G ++ + IP      +      W T       
Sbjct: 180 VGAYVSFFGNRYSIVGVLEEQGSVGNDSGVDRTILIPVENASRLDQTGGFWYTITVSTSD 239

Query: 216 PNMMLVLPAQGVSSWALREQLRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQA 275
           P  M     Q      L  ++R      L    +  E V   + G  +  +   LR I  
Sbjct: 240 PTKMEYEMGQATG---LMRKVREDRVGEL----DSFEVVKSNNVGESLEEVAGYLR-IGG 291

Query: 276 FLAASGMMTMAVGILGVANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIG 335
           F    G +T+    +G+ N+M ++VTERTREIG+R A+GATP+RI+QQFL+E +++ ++G
Sbjct: 292 F--GIGFITLLGASVGLMNIMLVSVTERTREIGIRKALGATPKRIRQQFLIEAIVICIMG 349

Query: 336 ALVGLLLAY-FGVLLLNHLG----LPTWLGEPVITSTTVWLSMLVTSILALAAAYFPARR 390
            + G+L+    G ++ + +G    L  WL         + L+ ++  ++ L +   PA +
Sbjct: 350 GVFGVLVGMGIGNIVASFVGPGGFLVPWL--------WMLLAFMICVLVGLVSGVIPAIK 401

Query: 391 AAQLEPVIAL 400
           A++L+P+ AL
Sbjct: 402 ASKLDPIEAL 411