Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., ABC transporter permease from Bacteroides stercoris CC31F

 Score =  109 bits (272), Expect = 2e-28
 Identities = 98/414 (23%), Positives = 185/414 (44%), Gaps = 41/414 (9%)

Query: 11  TLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASGQTSEVW 70
           T+  ++ +S+L    + WG+  +V L+  G+G        F      +  +A+ +TSE +
Sbjct: 14  TITRNKTRSLLTAFGVFWGIFMLVALIGGGQGMQEQMKAQFEGFATNSGFIAAQKTSEAY 73

Query: 71  QGMPARRPIQLTESLMREVAQRPEIQR---------YSIVYENREVSITQQRGTAIGSMV 121
           +G    R   L    +  V     I+           + VY   +   +          V
Sbjct: 74  KGFRKGRWWDLEMEDVERVRSIDGIKTATPSFALWGQTAVYGENKYECS----------V 123

Query: 122 SGVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAATSQLKIGDE-----FKIR 176
            G+   Y  +   ++T G R  +  D    R+V ++G  V   S  K G++      ++ 
Sbjct: 124 KGLYPEYEQIEHQEMTYG-RFINDVDIREARKVCVIGKRVYE-SLFKPGEDPCGKYIRVN 181

Query: 177 GIAFRVIGIMDDESSRFSFGD-NQKVFIPSSTFKDIWDTQPNMMLV--LPAQGVSSWALR 233
           GI +RVIG+   E +    G  ++ V +P +T +  ++    + +V  +   GV    + 
Sbjct: 182 GIYYRVIGMCSSEGNVNIQGQASEAVTLPFTTMQQTYNLGQRIDVVCFIMKPGVKVKDVE 241

Query: 234 EQLRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMTMAVGILGVA 293
            ++ H      + SP+D++A+   +  +  +++  ++ G +  +   G+ T+  G +GV+
Sbjct: 242 PEIEHRIKAAHYISPDDKQAIMFLNAEAMFSMMDTLMTGTRILIWMVGLGTLFAGAIGVS 301

Query: 294 NMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAYFGVLLLNHL 353
           N+M + V ERT EIG+R AIGA P+ I QQ L E ++L  +  + G+    F VL+L   
Sbjct: 302 NIMMVTVKERTTEIGIRRAIGARPKDILQQILSESMVLTTVAGMAGI---SFAVLILQI- 357

Query: 354 GLPTWLGEPVITSTTVWLSM-------LVTSILALAAAYFPARRAAQLEPVIAL 400
            L +   +P +  T   +S         +   L + A   PA RA  ++P+ A+
Sbjct: 358 -LESAANDPGVIKTHYQVSFGLAIGTCALLIALGMLAGLAPAYRAMAIKPIEAI 410