Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., efflux ABC transporter, permease protein from Bacteroides ovatus ATCC 8483

 Score =  108 bits (269), Expect = 4e-28
 Identities = 98/410 (23%), Positives = 187/410 (45%), Gaps = 33/410 (8%)

Query: 11  TLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASGQTSEVW 70
           T+  ++ +S+L    + WG+  +V L+  G+G      ++F      +  + S +T E +
Sbjct: 14  TITRNKTRSLLTAFGVFWGIFMLVALIGGGQGLEDMMKKNFEGFATNSGFLVSQRTGEAY 73

Query: 71  QGMPARR-------PIQLTESLMREVAQ-RPEIQRYS--IVYENREVSITQQRGTAIGSM 120
           +G    R        I    S ++EV    P + R+    VYE+++   +          
Sbjct: 74  KGFRKGRWWNLESTDIDRLRSQVKEVEIITPSVARWGSKAVYEDKKYDCS---------- 123

Query: 121 VSGVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAATSQLKIGDE-----FKI 175
           V G+   Y  +   ++  G R  +  D    R+V ++G  +   S  K G++      ++
Sbjct: 124 VKGLYPDYLHIESQEMAYG-RFINEVDIKEARKVCVIGKRIYE-SLFKPGEDPCGKYVRV 181

Query: 176 RGIAFRVIGIMDDESSRFSFGD-NQKVFIPSSTFKDIWDT--QPNMMLVLPAQGVSSWAL 232
            GI ++VIG+   E      G  ++ V +P +T +  ++   + +++      GV    +
Sbjct: 182 DGIYYQVIGMSSSEGDMNIQGRASEAVTLPFTTMQQTYNLGGRIDVICFTAKHGVKVSEI 241

Query: 233 REQLRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMTMAVGILGV 292
           + ++        + SP+D++AV   +  +  +++  +  GI   +   G+ T+  G +GV
Sbjct: 242 QPKMEQVIKAAHYISPDDKQAVMCLNAEAMFSMVDNLFTGINILVWMVGLGTLLAGAIGV 301

Query: 293 ANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAYFGVLLLNH 352
           +N+M + V ERT EIG+R AIGA P+ I QQ L E ++L  I  + G+  A   VL L  
Sbjct: 302 SNIMMVTVKERTTEIGIRRAIGARPKDILQQILSESMVLTTIAGMCGISFAVM-VLQLVE 360

Query: 353 LGLPTWLGEP--VITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIAL 400
           +G     G+    +T      +  +   L + A   PA RA  ++P+ A+
Sbjct: 361 MGANADGGDTRFQVTFGLAIGTCALLIALGMLAGLAPAYRAMAIKPIEAI 410