Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., Macrolide export ATP-binding/permease protein MacB from Alteromonas macleodii MIT1002

 Score =  105 bits (262), Expect = 4e-27
 Identities = 97/409 (23%), Positives = 181/409 (44%), Gaps = 34/409 (8%)

Query: 5   LQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASG 64
           L  ++  L  +  +++L +  I  GV +VV +MA+GEG  +        +L+  + + + 
Sbjct: 268 LSMAFTALRMNWFRTLLTLLGIIIGVAAVVTMMAIGEGGKQQ-------VLERIETIGTN 320

Query: 65  QTSEVWQGMPARRPIQLTESLMREVAQRPEIQRYSIVYENREVSIT-QQRGTAIGSMVSG 123
             S    G   R    +    + +      +   + V   R    T +         ++G
Sbjct: 321 LISIRPGGRNMRSSGDIASLTLADATALKSVPGVAYVAPERSARATIRYSENDFSGRITG 380

Query: 124 VDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAAT----SQLKIGDEFKIRGIA 179
               YF     ++  G   FS  D  N+  V ++GD VA T        +G+   ++   
Sbjct: 381 TTPDYFHAKDWEMAQGVF-FSDEDVTNYAPVVVIGDTVAETLFEDKYRAVGEYILMQNAF 439

Query: 180 FRVIGIMDDESSRFSFGD-NQKVFIPSSTFKDIWDTQPNMMLVLPAQGVSSWALREQLRH 238
           ++V+G++  + +     D + +V IP +T +         + V     +SS  ++ +   
Sbjct: 440 YQVVGVLHSKGASAGGNDMDDEVLIPVTTGR---------LKVFGRDYLSSITIKAESTE 490

Query: 239 TFAQ------RLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMTMAVGILGV 292
              Q       L      QE V +    S V  +T     +   LA+   +++ VG +GV
Sbjct: 491 VATQVKDDVLALLVERHGQEDVMVRTTESLVEAVTETQDTLTWLLASVAAISLFVGGIGV 550

Query: 293 ANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAYFGVLLLNH 352
            N+M + V+ER REIG+R+A GA P+ I +QF +E  ++ ++G + G+LL YF VL++  
Sbjct: 551 MNIMLVNVSERKREIGLRIATGAKPRDILRQFNIEAWVVCILGGIFGILLGYFVVLIVAS 610

Query: 353 LGLPTWLGEPVITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIALS 401
             +P        T     L+ + +  + L   Y PA++A++L P+ AL+
Sbjct: 611 FSVPV-----AYTLMPPVLAFVTSLAVGLIFGYAPAQKASKLNPIDALA 654