Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., ABC transporter nucleotide binding/ATPase from Agrobacterium fabrum C58

 Score =  108 bits (269), Expect = 6e-28
 Identities = 99/405 (24%), Positives = 193/405 (47%), Gaps = 24/405 (5%)

Query: 5   LQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASG 64
           L+ +   + AH+++S+L +  I  G+ SV  + ALG G  +    S   L   T  V +G
Sbjct: 258 LRMAGAAIWAHKMRSLLTMLGIIIGIASVAAISALGAGSQQQILSSISSLGTNTIEVRAG 317

Query: 65  QTSEVWQGMPARRPIQLTESLMREVAQRPEIQRYSIVYENREVSITQQRGT-AIGSMVSG 123
           +    +  + A +   L  +    +  +P +     V      S+T +R   A+ + V+G
Sbjct: 318 KG---FGDLEAGKIRTLVPADAEALVNQPYVDS---VTPTVTTSVTVKRAAVAVNASVTG 371

Query: 124 VDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAATSQLK-----IGDEFKIRGI 178
           V   +F + GL+L  G   F   D   + +  ++ D  AA          +G    +  +
Sbjct: 372 VGADFFRVRGLELAHGQL-FDAQDVIAYSQNVVI-DASAARDLFPDRVNPVGQVILLGTM 429

Query: 179 AFRVIGIMDDESSRFSFGDNQKVFIPSSTFKDIWDTQPNM--MLVLPAQGVSSWALREQL 236
             RV+G+   E+S     D   V+ P +T       +PN+  + V     V    +   +
Sbjct: 430 PARVVGVTKRENSFGPAVDTLTVYAPYTTVMGRMLGRPNVDGITVRIRDDVDPGNVEAAV 489

Query: 237 RHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMTMAVGILGVANMM 296
                +R        +  FL +  +    I    + +   +++  ++++ VG +GV N+M
Sbjct: 490 TRLIERR-----HGAKDFFLTNSATIRETIETTTQTLTLLISSVAVISLIVGGIGVMNIM 544

Query: 297 FLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAYFGVLLLNHLGLP 356
            ++VTERT+EIGVR+A+GA    I  QFL+E +++ ++G L+G++LA  G+  L +L  P
Sbjct: 545 LVSVTERTKEIGVRVAVGARRSDILSQFLIEAVMVCLVGGLMGIMLA-LGISALFNLLSP 603

Query: 357 TWLGEPVITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIALS 401
            +  + + +  ++ ++   ++++ +   + PAR AA+L+P+ AL+
Sbjct: 604 DF--KMIFSPGSIIVAFACSTLIGIVFGFLPARNAAKLDPIEALA 646