Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., TolC family outer membrane protein from Rhodanobacter sp000427505 FW510-R12

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 33/296 (11%)

Query: 28  AWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAGMNWSESQNG-----SSSY 82
           A++ A+   P    A+ +   + +    A++ LLP +  S  +N     N      + S 
Sbjct: 27  AYRDARANDPVLSQADATRLATAEGVDQARALLLPQIGASMSLNQINGGNQIGHSRTRSI 86

Query: 83  GATIEQTLWDSRKWSALDKA----DADWVLAQLERNQAYNQLAHQLLSAYFALAEAQSNL 138
             T+ QT+ D  K++ L  A    DA   L Q    + Y ++A    +AYF +  ++  L
Sbjct: 87  NGTLSQTVLDFSKYANLKAAHSASDAQDELYQAAAQELYGRVA----AAYFGVLTSEDEL 142

Query: 139 TLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEESTILNAQAELETKRSQLS 198
           T A+  +    Q    ++QR+  G     ++ + +      +S  +  Q  L   R  L+
Sbjct: 143 TFAKANEDAFRQQYEQSDQRFKVGLSAITDVYQAKAYYEAAKSQTIATQNTLNDAREALT 202

Query: 199 ILINASAPQV----DEVDTQTPTPSWPFSAELDDWLTAAKDHSPELLIAIQKVAISQIAK 254
            +      ++    D++  Q PTP     A+ D W+  A + +P LL     V  +Q   
Sbjct: 203 QVTGKPTGELKKLRDDLPMQPPTP-----ADQDSWVKQALETNPNLLTQKYNVQTAQHNI 257

Query: 255 QQSQSGYYPSLRASAGYQDG----DQRNG-------EFNAGLTLSIPIDLNGATRS 299
             +++G+ P++ A   Y  G    D   G           GLTL++PI   G T+S
Sbjct: 258 SAARAGHLPTITAGVSYGKGAGWSDSNAGARYRDPSSTTIGLTLNVPIFSGGFTQS 313