Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., TolC family outer membrane protein from Variovorax sp. OAS795

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 72/350 (20%), Positives = 141/350 (40%), Gaps = 34/350 (9%)

Query: 79  SSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQLAHQLLSAYFALAEAQSNL 138
           + + G    Q L+    W+  ++      +A+     A   L  ++  AYF +  +Q +L
Sbjct: 101 TQNIGVNATQPLYRPANWATYEQGKRQAEIAEAVLTAAEQDLIVRVSQAYFDVLASQDSL 160

Query: 139 TLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEESTILNAQAELETKRSQLS 198
           TL + ++   A+ LA A++ +  G     +  E +       +  + A+ +L+ K+  L 
Sbjct: 161 TLVRAQKVAVAEQLASAKRNFEVGTSTITDTREAQARYDLVIAQEIAAENDLQVKKVVLD 220

Query: 199 ILI----NASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPELLIAIQKVAISQIAK 254
            L+    +   P    V   T  P     A ++ W+  A+D  P +  A   + ++ +  
Sbjct: 221 QLVGRPGSVPVPLAQPVVLPTAMP-----ANIEAWVAQAEDVHPSIRQARLGLDVAGLEI 275

Query: 255 QQSQSGYYPSLRASAGYQDGDQRNG--------EFNA---GLTLSIPIDLNGATRSDNEK 303
           +++++G+ P+L A+ GY       G          NA   G+  ++P+    AT +  ++
Sbjct: 276 RKAEAGHKPTLDANLGYNVTRNPQGTSTSTVGTRINAASVGVVFNLPLFAGFATENRIKE 335

Query: 304 AHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRDKVLRSKQQLFDA 363
                L  + Q R V   L    R   Q     +  +     QV   +    S Q   DA
Sbjct: 336 T----LALEDQSRSV---LEGTRRSVAQATRAAYLGLVSGAGQVKALEAAEASSQSALDA 388

Query: 364 -------GLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQL 406
                  G+    D+++  + LF+ K +LA   Y+     ++L +  G L
Sbjct: 389 NRLGYQVGVRINIDVLNSQSQLFQTKRDLAQARYNVLLGNLKLRQANGTL 438