Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Fusaric acid resistance protein FusA from Pseudomonas protegens RBAN4

 Score = 74.7 bits (182), Expect = 6e-18
 Identities = 85/384 (22%), Positives = 163/384 (42%), Gaps = 32/384 (8%)

Query: 30  QQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAGMNWSESQNGSSSYG-----A 84
           ++A + SPD  IA      +    Y A ++  P+L  SAG++ S         G     A
Sbjct: 75  REALRDSPDMQIAAARAHQASAAAYAADAERYPTLDASAGISRSRLAKDQDPLGQGDAYA 134

Query: 85  TIEQ---------TLWDSRK--W-SALDKADADWVLAQLERNQAYNQLAHQLLSAYFALA 132
           T+            LW  ++  W +AL +A A    A+++R  A   LA  +  AY  L 
Sbjct: 135 TVRNISAGFNYNFDLWGGQRDAWEAALGQARA----AEVDRQAAQLTLAADVARAYSDLG 190

Query: 133 EAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEESTILNAQAELET 192
           +A     LA        Q+L ++++R  AG     +L++ +  +   E+++++A+  L +
Sbjct: 191 QAHIVYDLASDDLKRTRQMLDLSQRRLSAGIDSQYQLQQTQSLEASSEASLIDAEKRLSS 250

Query: 193 KRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTA-AKDHSPELLIAIQKVAISQ 251
            +  L++L+     +  E+    P      +  +   L A      P+L+ A  +V  + 
Sbjct: 251 AKIALAVLLGKGPDRGSEI--ARPKVLQASAVAVPSVLPAELLGRRPDLVAARWRVEAAS 308

Query: 252 IAKQQSQSGYYPSLR--ASAGYQD--GDQRNGE----FNAGLTLSIPIDLNGATRSDNEK 303
                +++ +YP+L   ASAG +   GD   G     F+   T+S+PI   G  R++ + 
Sbjct: 309 KDIDSAKTRFYPNLNLTASAGAESLLGDAMFGSASRFFSIAPTISLPIFDGGRLRANLDS 368

Query: 304 AHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRDKVLRSKQQLFDA 363
              ++ +A  Q  K  +    ++   I Q+    +QI               +  Q + +
Sbjct: 369 RDADYDLAVAQYNKSLVKALGDVSDTINQLRDIGRQIGAQQHATDIAQDSYNTVVQRYGS 428

Query: 364 GLAEASDLIDVHNSLFRAKHNLAS 387
           G+    D++ +   L +A+  LA+
Sbjct: 429 GIGNYLDVLSIEQQLLQAQRQLAN 452



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 225 ELDDWLTAAKDHSPELLIAIQKVAISQIAKQQSQSGYYPSLRASAG 270
           +LD  +  A   SP++ IA  +   +  A   + +  YP+L ASAG
Sbjct: 69  QLDGLIREALRDSPDMQIAAARAHQASAAAYAADAERYPTLDASAG 114