Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., TolC family outer membrane protein from Pectobacterium carotovorum WPP14

 Score =  100 bits (250), Expect = 7e-26
 Identities = 91/427 (21%), Positives = 182/427 (42%), Gaps = 22/427 (5%)

Query: 13  SLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSG------ 66
           +L+ S+ + AL + +AWQQA    P    A  +     ++K + ++ LLP ++       
Sbjct: 23  TLIYSAPSQALGLMEAWQQALTHDPAFQAAVHARNADSEEKNIGRAGLLPKVTYDYSQSR 82

Query: 67  -----SAGMNWSESQNGSSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQLA 121
                +AG   SE    S +   +++Q L D   WS   + +A  VLA  +   A  QL 
Sbjct: 83  NDSTVTAGGQQSERDYTSRASSFSLQQPLIDYAAWSRYQQGEASAVLADEQLRDASQQLL 142

Query: 122 HQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEES 181
            +L  AY  +  ++  + L Q +Q    +   + ++ +  G+    ++ E        E+
Sbjct: 143 VRLFQAYTNVLFSREQIALVQAQQRAYREQYQLNQRLFQQGEGTRTDMLETEARVNLTEA 202

Query: 182 TILNAQAELETKRSQLSILINASAPQVDEVDTQTP--TPSWPFSAELDDWLTAAKDHSPE 239
            ++ AQ  L+    +L  L+      VD++   TP  TP     A    W + A  H+ +
Sbjct: 203 QLIEAQDNLDISLRELETLLGMPV-GVDQLAALTPRFTPQALQPAGYQHWQSLALRHNAQ 261

Query: 240 LLIAIQKVAISQIAKQQSQSGYYP--SLRASAGYQDGDQRNG------EFNAGLTLSIPI 291
           LL   Q +A+++   +++++G+ P  +L AS      D  N         + G+ +S+PI
Sbjct: 262 LLALNQSLAVAKYGIERNRAGHLPQVTLVASTRNTQSDTENSYNQKYDTRSIGIRVSVPI 321

Query: 292 DLNGATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRD 351
              G   +   +A   +    +++ +    +   LR+Q   V     +I   +       
Sbjct: 322 FAGGGVSAATRQAQERYQQTAREKDEQTATIQTELRRQFNLVTSSQAKIRAYELTEKSAL 381

Query: 352 KVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLNDNAI 411
            ++ + Q+    G     D+++    L+ A+ +L    Y++    ++L    G L++  +
Sbjct: 382 ALVTATQKSVQGGERVNLDVLNAEQQLYGARRDLTEARYTWLTAWLQLRYYAGTLDEQTL 441

Query: 412 AQLSGAF 418
            QL+  F
Sbjct: 442 RQLATYF 448