Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., outer membrane protein from Magnetospirillum magneticum AMB-1

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 74/369 (20%), Positives = 153/369 (41%), Gaps = 24/369 (6%)

Query: 62  PSLSGSAGMNWSESQNGSSSYGATIEQTLWDSRKW-SALDKADADWVLAQLERNQAYNQL 120
           P   G+ G  + + +N S   G T+ Q ++D     S ++ A +   +++ +        
Sbjct: 89  PDRRGTQGKPFMDKRNTS---GLTVTQKIFDGFATDSTVESAKSTRRISESDLRATRQAT 145

Query: 121 AHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGK-IKSVELEELRVNQLDE 179
             +   AY  +      + L+++ +   A+   + ++R   G  I S  L+  +  QL +
Sbjct: 146 LLEGAIAYLDVMRTTKLVALSRENERKVAEQQNLEDERVQKGSGIASDVLQAKQRLQLAK 205

Query: 180 ESTILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPE 239
           E  + N + E     ++ + +    AP V  + +  P P       LD  L AA+  +P 
Sbjct: 206 ERRV-NYEGEFHAAVARFTQVFG-HAPDVASL-SDPPLPLDLIPETLDQSLEAAEKDNPT 262

Query: 240 LLIAIQKVAISQIAKQQSQSGYYPSLR--ASAGYQDGDQRNGEFNAGLTLSIPI--DLNG 295
           L  A   + +S   +  +++GYYP+L     A Y+ G           +L +    +L  
Sbjct: 263 LESASSSIVLSGEKRNIAEAGYYPTLDLVGKADYEHGKNATVGVRRDWSLMLVASWELFS 322

Query: 296 ATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQV-------T 348
             ++D   A  +W     +  +     +   R+  +Q    W +I  A Q++        
Sbjct: 323 GFKTDASVAQASWDHGVSKDNR-----YHTSRKTAEQTRTAWHKIQTARQRLDLLENAAV 377

Query: 349 HRDKVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLND 408
             ++V  +  +  DAG A  ++++D    +  A+ N    +YS ++   EL+ L G+L  
Sbjct: 378 LAEEVWAATMKKRDAGKATVTEVLDEETRINEARINYTGAYYSMYQASYELIALMGRLEV 437

Query: 409 NAIAQLSGA 417
           + +++   A
Sbjct: 438 DNLSRAKPA 446