Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., TolC family outer membrane protein from Serratia liquefaciens MT49

 Score =  100 bits (248), Expect = 1e-25
 Identities = 95/445 (21%), Positives = 183/445 (41%), Gaps = 36/445 (8%)

Query: 6   LTACVLTSLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLS 65
           L AC L      + A+ALS+ +A+  A    P    A       E+++ + ++ LLP +S
Sbjct: 14  LVACWLLG----TPAYALSLTEAFALAIHNDPTLQSAVQEKLAGEEERTIGRAGLLPQVS 69

Query: 66  GS---AGMNWSE-------------------SQNGSSSYGATIEQTLWDSRKWSALDKAD 103
            +   A  NW                     +Q  SSS   T+ Q L+D   W+      
Sbjct: 70  ANYQNAPRNWQNQKYQGADIFNQPTGEQSVNTQYRSSSLSVTLTQPLFDYAAWARYQAGV 129

Query: 104 ADWVLAQLERNQAYNQLAHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGK 163
           A  +LA         ++  +L+ AY  +A  +  + L Q +    A+ LA+ ++    G+
Sbjct: 130 AQALLADERYRGKLQEMTTRLVEAYIEVAYRREAIALTQAQVTTYAEQLALNQRLSSLGE 189

Query: 164 IKSVELEELRVNQLDEESTILNAQAELETKRSQLSILINASAPQVDEVDTQ--TPTPSWP 221
               ++ E         +  + AQ  L+  ++ LS LI       D +  Q  T +P   
Sbjct: 190 GTVTDVAETEARYGIALTQRIEAQDALDVSQNTLSNLIGVPVASFDPIAAQPGTFSPLVL 249

Query: 222 FSAELDDWLTAAKDHSPELLIAIQKVAISQIAKQQSQSGYYPSLRASAGYQDGD------ 275
               L+ W   AK ++P L  A Q + +++   +++++G+ P +   A + + D      
Sbjct: 250 KYPTLEAWQRQAKSNNPALRSAQQGINVARYEVERNRAGHLPRVALYASHSENDSSSDNT 309

Query: 276 --QRNGEFNAGLTLSIPIDLNGATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQV 333
             Q+    + G+ +SIP+   G   +   +A   +  A+ +       +  +L+QQ +  
Sbjct: 310 VGQKYRTDSVGIQVSIPLYSGGGVSASTSQAAARYQQAKYEMAAQSDKILNDLQQQYRLC 369

Query: 334 EIEWQQITMADQQVTHRDKVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYW 393
                ++   +  +   DK + + +Q   AG+    D+++     +  +   A   Y Y 
Sbjct: 370 RNGEAKLKAYELALQAADKQVVATRQSVLAGMRVNVDVLNAEQQRYTTQKEYAEAKYGYL 429

Query: 394 RQRIELLKLTGQLNDNAIAQLSGAF 418
           +  + L  L G LN+  IAQ++  F
Sbjct: 430 KAWVALQSLAGTLNEKDIAQVARYF 454