Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., type I secretion outer membrane protein, TolC family from Enterobacter asburiae PDN3

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 95/424 (22%), Positives = 172/424 (40%), Gaps = 26/424 (6%)

Query: 17  SSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAGMNWSES- 75
           S+ + A ++ Q +QQA+  +PD   +      + +    A+S LLP L   A   +S   
Sbjct: 17  SAMSQAENLLQVYQQARLGNPDLRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGF 76

Query: 76  ------QNGSSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQLAHQLLSAYF 129
                  + ++S    + QTL+D  KW AL   +    +  +        L     +AYF
Sbjct: 77  RDANGVNSNATSASLQLTQTLFDMSKWRALTLQEKSAGIQDVTYQTDQQTLILNTATAYF 136

Query: 130 ALAEAQSNLTLAQ-QKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEESTILNAQA 188
            +  A   L+  + QKQA   QL     QR+  G +   +++  R       +  + A+ 
Sbjct: 137 NVLSAIDALSYTEAQKQAIYRQLDQTT-QRFNVGLVAITDVQNARSQYDTVLANEVTARN 195

Query: 189 ELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPELLIAIQKVA 248
            L+     L  +     P++  ++  +     P +  ++  L  A++ +  LL A     
Sbjct: 196 NLDNALESLRQVTGNYYPELASLNVDSFKTDKPQA--VNALLKEAENRNLSLLQARLSQD 253

Query: 249 ISQIAKQQSQSGYYP--SLRASAGYQD-------------GDQRNGEFNAGLTLSIPIDL 293
           +++   +Q+Q G+ P  SL AS G  D              D   G+   GL+ S+P+  
Sbjct: 254 LAREQIRQAQDGHLPTLSLSASTGVSDTTYSGSKTNTSQYDDSNMGQNKVGLSFSLPLYQ 313

Query: 294 NGATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRDKV 353
            G   S  ++A  N++ A +Q       + Q +R     V      I    Q V      
Sbjct: 314 GGQVNSQVKQAQYNFVGASEQLESAHRNVVQTVRSSFNNVNASISSINAYKQAVVSAQSS 373

Query: 354 LRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLNDNAIAQ 413
           L + +  +  G     D++D   +L+ AK  L+S  Y Y   ++ + +  G LN+  +  
Sbjct: 374 LDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSSARYQYLINQLNIKQALGTLNEQDLQM 433

Query: 414 LSGA 417
           L+ A
Sbjct: 434 LNSA 437