Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., Outer membrane protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 54.3 bits (129), Expect = 7e-12
 Identities = 66/351 (18%), Positives = 139/351 (39%), Gaps = 36/351 (10%)

Query: 79  SSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQLAHQLLSAYFALAEAQSNL 138
           S   G  + Q ++       L  A       +L        + + +   Y+++   +  +
Sbjct: 104 SMKAGVQVSQLIFSQSYLVGLKAAKTSEEFYRLMTQMTEEDIIYDVALNYYSVISTELQM 163

Query: 139 TLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEESTILNAQAELETKRSQLS 198
              +       +L  I   +Y     + V+   ++VN    E+ + N +  +E +++ L 
Sbjct: 164 DNLRANHDQLKRLEEIIRSQYENDLARKVDYNRVKVNLTTLETEMDNLEIAIEQRKNYLK 223

Query: 199 ILINASA-PQVDEVDTQTPTPSWPFSA-ELDDWLTAAKDHSPELLIAIQKVAISQIAKQQ 256
           +++      Q++         S P  A ++D  L+   D    L +  ++  ++ +    
Sbjct: 224 LVMGIPVNTQIELAQYDFDDKSLPLQALQMDPDLSQRYD----LKVLSKQQELNDLNVDN 279

Query: 257 SQSGYYPSLRASAGYQDGDQRNGEFN-------------AGLTLSIPIDLNG-------- 295
            +SGYYP+L A A   + +  + EF+              GL LS+PI  +G        
Sbjct: 280 IKSGYYPTLSAFADV-NYNAFSSEFDFLSTGHVWYRGALVGLKLSLPI-FDGFQKKHKIA 337

Query: 296 ATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRDKVLR 355
             R + +K   +  MA+Q      +   + L   I+ ++ +   + +++        V R
Sbjct: 338 QARVEGQKIKYDQYMAEQNAEAEYLNAVKKLNNSIKSLKAQESNLELSED-------VFR 390

Query: 356 SKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQL 406
              QL+  GL+  +DL+D   SL +A+ +   +  +      +L K TGQ+
Sbjct: 391 QTGQLYREGLSPLTDLLDAETSLRQARSSYYRQIINVKTAEADLYKSTGQI 441