Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., TolC family protein from Bacteroides stercoris CC31F

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 102/485 (21%), Positives = 188/485 (38%), Gaps = 103/485 (21%)

Query: 6   LTACVLTSLMASSSAFALSIE------QAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSD 59
           L AC   SL AS+    L+ E      +A   A+ QS DA +A   ++ +  +    ++D
Sbjct: 7   LAACFGISLFASAQNDTLTHEREITLAEAIALARTQSVDAAVALNELKTAYWEYRTFRAD 66

Query: 60  LLPSLSGSAGM-----NWSESQNGSSSYG------------ATIEQTLW----------- 91
           LLP ++ +  +     ++S  QN   SY              +I+Q +W           
Sbjct: 67  LLPEINFTGTLPNYNKSYSTYQNSDGSYSFVRNNTLGLSGALSIDQNIWFTGGKLSLASS 126

Query: 92  -------------------------------DSRKWSALDKADADWVLAQLERNQAYNQL 120
                                          +S KW+   +    +  A+     A  Q+
Sbjct: 127 LDYIKQLGSGGDKQFMSVPVSLELTQPIFGVNSLKWNRRIEP-VRYAEAKAAFISATEQV 185

Query: 121 AHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEE 180
             + ++ +F L  A+  L  AQQ +A+  +L  +A  +   G+I   +L +L++N L  +
Sbjct: 186 TMKTITYFFELLLAKEALATAQQNKANSDRLYEVAIAKRKMGQISENDLLQLKLNSLQGK 245

Query: 181 STILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPEL 240
           + +  A++ L  K  QL   +  S       +++   P  P S           D+   L
Sbjct: 246 ADVTEAESTLNAKMFQLRSFLGVS-------ESEGLNPVIPASVP-----GIKMDYDRVL 293

Query: 241 LIAIQKVAISQ-IAKQQSQSGYYPS----------LRASAGYQDGDQRNGEFNAG----- 284
             A+++ + +Q I ++Q ++ Y  +          L AS GY     +N EF++      
Sbjct: 294 NKALERNSFAQNIRRRQLEADYEVATARGNLRSIDLFASVGYTG---QNYEFSSAYQDLL 350

Query: 285 ------LTLSIPIDLNGATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQ 338
                 + + IPI   G  R     A  N  +   + R+ ++  +Q++   +     + Q
Sbjct: 351 DNQIVKVGVKIPILDWGKRRGKVRVAKSNREVVLSKIRQEQMDFNQDIFLLVANFNNQAQ 410

Query: 339 QITMADQQVTHRDKVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIE 398
           Q+ +A++     +K  ++  + F  G     DL D  NS   A+    S  Y YW    +
Sbjct: 411 QLEIAEEADQIAEKRYKTSVETFMIGKISTLDLNDAQNSKDEARQKHISELYYYWYYFYQ 470

Query: 399 LLKLT 403
           L  LT
Sbjct: 471 LRSLT 475