Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., outer membrane efflux protein from Bacteroides ovatus ATCC 8483

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 69/292 (23%), Positives = 127/292 (43%), Gaps = 18/292 (6%)

Query: 125 LSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEESTIL 184
           ++ +FALA AQS+  +A    A+   L   A+ RY  G I   E+ +L +N+L EE+  +
Sbjct: 194 INKFFALATAQSDYDIASFNYANADTLYRYAQGRYNIGTITENEMLQLELNRLTEETNRM 253

Query: 185 NAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPELLIAI 244
           NA  E++    +L   +     +   V      P   FS  L++ L  A ++SP++    
Sbjct: 254 NALIEMDNCMQELRSYLGIHEDRELRVLVSPQIPD--FSVNLNEALALAYENSPDIQTME 311

Query: 245 QKVAISQ--IAKQQSQSGYYPSLRASAGY-QDGDQRNGEFN-------AGLTLSIPIDLN 294
           ++   S+  +AK ++ +G    +    G  Q  D+    +          + +S+PI   
Sbjct: 312 RRKLESESAVAKARANAGLKADIYLRFGLTQTADKLPDAYRNLLDQQYVSIGISLPILDW 371

Query: 295 GATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMA---DQQVTHRD 351
           G  +     A  N  +   Q  +       N+R+ ++Q  ++ Q++ +A   D+    R 
Sbjct: 372 GRGKGQVRVARSNRDLVYTQVEQSRTDFELNVRKLVKQFNLQTQRVRIAARTDETAQRRS 431

Query: 352 KVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLT 403
           +V R   +L+  G +   DL    +    A+ N  S  Y+YW     L  +T
Sbjct: 432 EVAR---KLYLLGKSTILDLNASISEKDSARRNYISALYNYWSLYYTLRSMT 480



 Score = 31.2 bits (69), Expect = 7e-05
 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 10 VLTSLM-ASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSA 68
          +LT L+ A      LS++Q  + A+ +SPDA  A  S + +  +    +++ LPSLS ++
Sbjct: 22 LLTELLTAQDQTTELSLKQVIEIARMESPDAQTARHSFRSAYWNYKYYRANYLPSLSLTS 81

Query: 69 GMNWSESQN 77
            N + + N
Sbjct: 82 DPNLNRAIN 90