Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., Outer membrane protein TolC precursor from Alteromonas macleodii MIT1002

 Score =  113 bits (283), Expect = 1e-29
 Identities = 89/431 (20%), Positives = 183/431 (42%), Gaps = 32/431 (7%)

Query: 17  SSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAGMNWSESQ 76
           ++ A A  + Q +QQA    P  + A+     + +   +++++LLP +SGS G   S ++
Sbjct: 15  TTGALADDLMQVYQQALANDPLVNQAKAQRDAAFEGISISRANLLPQISGSVGYTTSTAE 74

Query: 77  NGSS--------------------SYGATIEQTLWDSRKWSALDKADADWVLAQLERNQA 116
              +                     YG  ++ +L+D   W  LD+A+     +  +   +
Sbjct: 75  RAQTLGANADDLQIVVFETDVDTIDYGLQVQMSLYDHANWLGLDRAEKVAEQSDAQLAAS 134

Query: 117 YNQLAHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQ 176
              +  + ++AYF +  A+ N+     ++    + L    QR+  G     ++ E + N 
Sbjct: 135 MQDVIVRTVTAYFDVLRARDNVEFVGAEKRAIERQLEQTRQRFEVGLTAITDVHEAQANY 194

Query: 177 LDEESTILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDH 236
               +  + A+ +LE     L ++      ++  ++T+    + P  A +D+WL  A+D 
Sbjct: 195 DSTVAQEIQAKNQLEFALEALRVITGKYHDRLFGLNTENFAATMPVPAAVDEWLETAQDK 254

Query: 237 SPELLIAIQKVAISQIAKQQSQSGYYPSLRASAGY-QDGDQRNGEF-----------NAG 284
           +  LL+    + I++     ++SG+ P+L  +A   +  D  +  F           +  
Sbjct: 255 NLALLVDRLAMDIAKEDISIARSGHLPTLGLTANASRSKDDISNPFLQFETPYLDSQSVA 314

Query: 285 LTLSIPIDLNGATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMAD 344
           + L++PI       S  ++A  N++ A Q   +      Q++R     V+     I   +
Sbjct: 315 VQLNVPIYQGSRVSSQTDQAKFNYVAASQAAEQTYRQTVQSIRSSFNNVKASISTIRALE 374

Query: 345 QQVTHRDKVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTG 404
           Q V   D  L++ +  FD G     D++D   +LF A+ NLA   Y + +  + L +  G
Sbjct: 375 QSVVSADSALKATEAGFDVGTRTIVDVLDSTRNLFDARRNLAGARYDFIQSVVTLKQAAG 434

Query: 405 QLNDNAIAQLS 415
            L    +A ++
Sbjct: 435 TLTGEDVAMIN 445