Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., Outer membrane protein TolC from Acinetobacter radioresistens SK82

 Score = 75.1 bits (183), Expect = 4e-18
 Identities = 84/444 (18%), Positives = 182/444 (40%), Gaps = 35/444 (7%)

Query: 3   KGFLTACVLTSLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLP 62
           K FL+   LT+   SS  +AL + +A+Q+AKQ  P         Q  + +  +A+++ LP
Sbjct: 4   KIFLSLFFLTT---SSQLYALDLVEAYQRAKQSDPSWQANLYQYQADQLNLGIARTNFLP 60

Query: 63  SLSGSA-------GMNWSESQN--GSSSYG--------------ATIEQTLWDSRKWSAL 99
           ++S S        G N S S    G  ++G               T  Q L+    W   
Sbjct: 61  TVSVSGNITRKHQGSNQSNSVTIPGFENFGDALMSSTSTTKQISITARQPLFRKDAWEGY 120

Query: 100 DKADADWVLAQLERNQAYNQLAHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRY 159
            +     +L++++  Q        +  +YF +   Q+  +   Q++    + L +   + 
Sbjct: 121 KQVQTSVLLSEVQLRQRQQDHILNVAESYFNVLRQQTLTSSHLQEEKALLEQLEMMNAKL 180

Query: 160 LAGKIKSVELEELRVNQLDEESTILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPS 219
             G +   ++ E      +  +  +++  +L   + QL+ LI      +  V  +  +  
Sbjct: 181 REGLVARSDVSEANAQYQNARANRISSNVQLLLAQEQLAQLIGPYQESL-AVLQENFSYQ 239

Query: 220 WPFSAELDDWLTAAKDHSPELLIAIQKVAISQIAKQQSQSGYYPSLRASAGYQDGDQR-- 277
            P+ A L +W T A++ +  +  A  +   +   ++  ++  YP L A A Y    Q   
Sbjct: 240 QPYPANLQEWTTLAQNQNLSVQQARLQQKYNDDQRRIERAALYPQLEAVATYGYTKQSPE 299

Query: 278 -----NGEFN-AGLTLSIPIDLNGATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQ 331
                +G+F+  G+ ++  +   G T+ +  KA ++   A+ +          + +Q   
Sbjct: 300 TLISGDGQFDQIGVEMNWNLFNGGRTQQNIRKATVDIRRAEAELEAAVRKSTTDAKQAYL 359

Query: 332 QVEIEWQQITMADQQVTHRDKVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYS 391
           QV+ +  ++      +   + V R+ +  ++ GL    D++    + F A+ +  +  Y 
Sbjct: 360 QVQTDQNKLEARKAAMQSSELVSRASRAQYNEGLKTIVDVLLAQRNAFSARQDYVNAQYD 419

Query: 392 YWRQRIELLKLTGQLNDNAIAQLS 415
           +    + L    GQLN+  + +++
Sbjct: 420 HLINILRLKAAAGQLNEQDLQEMN 443