Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Macrolide export protein MacA from Xanthobacter sp. DMC5

 Score = 83.6 bits (205), Expect = 9e-21
 Identities = 96/369 (26%), Positives = 154/369 (41%), Gaps = 61/369 (16%)

Query: 38  VSRGTIEKQAVAVGQIMPSHSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQA 97
           V+RG + K  VA G +  +  V I SQI G+V E+ V EGQ V QGQPL+ +  N     
Sbjct: 37  VTRGELVKTVVASGHVETAFRVEIGSQITGMVREVLVDEGQAVTQGQPLVALETNELKAL 96

Query: 98  LTDASTELMQSEANLES--DLQRLANLERLVKQQIIPANYD-DYVRAKADVKA---KQAE 151
              A     Q+EA +    +L R A  E L + +   AN +  Y RA+   K+    +  
Sbjct: 97  EVQAQGAKAQAEARVRQMRELTRPAAEEALKQAKANLANAEAAYDRAQQLAKSGAGTRVT 156

Query: 152 VQQKRQNLELIRS---------------------GEASIGQAKLS----------STLYA 180
           +    +N+++ R+                      E  + QA  +          +T+ A
Sbjct: 157 LDDATKNIDVARTQVRTAELQVYTSSPGGSDYVMAETQLNQASANLEMVQARLGYATITA 216

Query: 181 PISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDAAQLNAGMPASI 240
           P  G +++  VE G  +      QA   ++ LA   ++     + E +   L  G  A  
Sbjct: 217 PRDGVLISRNVERGAVV------QAGKALLVLAPAGDMQLVLQIDEKNLGLLKLGQTALA 270

Query: 241 TVAPYPEQVINGQLTKVAIQSERLNNPENKDGKSFDNGFQVEIGQLDIPENMTLRSGFSA 300
           +   YP+Q     +T +        NP     ++     +V++   D P    LR   + 
Sbjct: 271 SADAYPDQRFAATVTYI--------NPSVDITRA---SVEVKLTVADPP--AYLRQDMTV 317

Query: 301 SAKITLQRAADVITLPERAL-QFEGETPMVLIA-DGSAQGYTAHPVKLGLSDGVQVEILE 358
           S  I + R A  + +P R +       P VL+  DG A+      V++GL  G  VEILE
Sbjct: 318 SVDIAVDRRAAAVIVPARTVHDATSAAPWVLVVRDGRAR---VQKVRIGLRAGEYVEILE 374

Query: 359 GVAEKDSIV 367
           GVA  + ++
Sbjct: 375 GVAPGEMVL 383