Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., Macrolide export protein MacA from Xanthobacter sp. DMC5

 Score =  120 bits (302), Expect = 5e-32
 Identities = 106/394 (26%), Positives = 183/394 (46%), Gaps = 36/394 (9%)

Query: 4   RWTLLATLVGVGLAGGYYTLTYTPESSSPLPTLNVSRGTIEKQAVAVGQIMPSHSVAIKS 63
           RW LLA L+  G  G  Y+    P   + L T  V+RG +E+  +A G + PS+ VA+ S
Sbjct: 31  RWGLLALLIAAGAYG--YSRYTAPVPGTGLMTAPVTRGNLEETVLASGTLKPSNLVAVGS 88

Query: 64  QINGIVGEIYVREGQHVEQGQPLIKVRP-------NPTPQALTDASTELMQSEANLESDL 116
           Q +G +  I V+ G  V++G  + ++              AL +   +  + EA L  + 
Sbjct: 89  QASGRILSIKVKLGDEVKKGDLIAQIDSVTQENSLRTAEAALANTRAQKAEKEATLVLNE 148

Query: 117 QRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLELIRSGEASIGQAKLS- 175
           Q LA  + +V Q+ +  +  D+  A + VK  +A++         I S + ++  A+ + 
Sbjct: 149 QTLARQKTMVAQKAV--SQADFEAADSAVKVTRAQLAALDAQ---IISAQVAVDTARANL 203

Query: 176 --STLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDAAQLN 233
             + + AP+ GT+L +  + G+ + +T   Q A  +  L  +  ++ +  +SE D  ++ 
Sbjct: 204 GYTQITAPVDGTVLALVAQQGQTLNAT---QTAPTVAILGQLDVMMVRAEISEADIIKVA 260

Query: 234 AGMPASITVAPYPEQVINGQLTKVAIQSERLNN----------PENKDGKSFDNGFQVEI 283
            GMP   TV   P++    +L  +    E L N            +    S  +     I
Sbjct: 261 PGMPLWFTVVGAPDERHYAKLGFIEPAPESLKNDSIFSTTSSSSSSSSSSSTTSSAIYYI 320

Query: 284 GQLDIPE-NMTLRSGFSASAKITLQRAADVITLPERALQFEGE--TPMVLIADGSAQGYT 340
           G  D+P     LR+  +    I L RA +V+T+P  AL+  G+     VL  DG+ +   
Sbjct: 321 GVFDVPNPKGRLRTYMTPEVHIILGRAENVLTVPSTALERAGKGWRVRVLHGDGTVE--- 377

Query: 341 AHPVKLGLSDGVQVEILEGVAEKDSIVDNSMLGG 374
             PV++GL+D V  EI  G+AE + +V    +GG
Sbjct: 378 RRPVEVGLNDKVTAEIRSGLAEGERVVTGEAVGG 411