Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 92/388 (23%), Positives = 161/388 (41%), Gaps = 74/388 (19%)

Query: 3   KRWTLLATLVGVGLAGGYYT------------LTYTPESSSPLPTLNVSRGTIEKQAVAV 50
           K+WT    L+ + L G                L   PE   P+  +  +         A+
Sbjct: 2   KKWTFFMLLIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEAI 61

Query: 51  GQIMPSHSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDASTELMQSEA 110
           G I P+  V + ++  G++ +I    G  V + QPL+          L D++ E     A
Sbjct: 62  GFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLV----------LLDSAVE----RA 107

Query: 111 NLESDLQRL----ANLER----LVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLELI 162
           NL+S   RL    A  ER      K  I   +YD+   A+A   A  A+++         
Sbjct: 108 NLKSTEARLPAAKAKYERYKGLFAKGSISKESYDE---AEASYYALSADIE--------- 155

Query: 163 RSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKG 222
            S +A+I + ++     AP +G I    V +G+ +      Q  T++++L D   +  + 
Sbjct: 156 -SLKATIARREIK----APFAGVIGIRNVFLGQYL------QPGTDIVRLEDTSVMRLRF 204

Query: 223 SVSEHDAAQLNAGMPASITVAPYPEQVINGQLTKVAIQSERLNNPENKDGKSFDNGFQVE 282
           +V + D ++++      I V  YP+    G ++ +            +   S  +G  ++
Sbjct: 205 TVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAI------------EPAVSVQSGL-IQ 251

Query: 283 IGQLDIP-ENMTLRSGFSASAKITLQRAADVITLPERALQFE--GETPMVLIADGSAQGY 339
           + Q DIP  +  LRSG  A A I L +  + +TLP+ A+ +   G+   ++  +   +  
Sbjct: 252 V-QADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIVSEENGEKRV 310

Query: 340 TAHPVKLGLSDGVQVEILEGVAEKDSIV 367
             H VK+G        ILEGV   D +V
Sbjct: 311 QQHVVKVGERSESIAHILEGVKPGDVVV 338