Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

 Score = 91.7 bits (226), Expect = 3e-23
 Identities = 95/382 (24%), Positives = 168/382 (43%), Gaps = 36/382 (9%)

Query: 11  LVGVGLAGGYYTLTYT--PESSSPLPTLNVSRGTIEKQAVAVGQIMPSHSVAIKSQINGI 68
           L G+GL G    L +T  P  + P+ T+ V+R  IE    A+G + P   V + +Q +G 
Sbjct: 13  LGGLGLLGLGSLLAWTSLPFGAQPVSTVAVTRADIESSVTALGTLQPRRYVDVGAQASGQ 72

Query: 69  VGEIYVREGQHVEQGQPLIKVRPNPTPQALTDA--------STELMQSEANLESDLQRLA 120
           +  ++V  G  V +GQ L+++ P+ T QA  DA          +L +  A L+   Q+L 
Sbjct: 73  IRNLHVEVGDQVHKGQLLVEIDPS-TQQAKLDAGRFSIDNLKAQLAEQRAQLKLAQQQLK 131

Query: 121 NLERLVKQQIIPANYDDYVRAKADVKAKQAEVQ----QKRQNLELIRSGEASIGQAKLSS 176
               L    +     +D   A+A +   QA +     Q RQ    +RS EA +G  +   
Sbjct: 132 RQRDLA--AVGATREEDLQTAEAQLNVTQARIDMYQAQIRQANASLRSDEAELGYTR--- 186

Query: 177 TLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDAAQLNAGM 236
            ++AP+ GT++ +    G+ +    + Q    ++++A +  +     VSE D  ++  GM
Sbjct: 187 -IFAPMDGTVVAVDAREGQTL---NAQQQTPLILRIAKLSPMTVWAQVSEADIGKIQPGM 242

Query: 237 PASITVAPYPEQVINGQLTKV-AIQSERLNNPENKDGKSFD-----NGFQV----EIGQL 286
            A  T     ++     + +V  I  + L+      G          G QV     +  +
Sbjct: 243 TAYFTTLAGGKRRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGATGSQVVQYTVLLDV 302

Query: 287 DIPENMTLRSGFSASAKITLQRAADVITLPERALQFEGETPMVLIADGSAQG-YTAHPVK 345
           D P+   L +  +      + +A+ V++ P  AL       + L       G      V+
Sbjct: 303 DNPDG-ALMAEMTTQVFFVVGQASQVLSAPLAALDDSDNEGLRLAQVFGRDGKVEQRKVR 361

Query: 346 LGLSDGVQVEILEGVAEKDSIV 367
            GLSD ++V+IL+G++E D +V
Sbjct: 362 TGLSDRLRVQILDGLSEGDRLV 383