Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., efflux transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  100 bits (250), Expect = 6e-26
 Identities = 92/385 (23%), Positives = 176/385 (45%), Gaps = 69/385 (17%)

Query: 43  IEKQAVAVGQIMPSHSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRP----------- 91
           I ++  A G++ P   V I   ++G + E+ V EG  V +GQ L+++RP           
Sbjct: 50  IVEKVSASGKVQPETEVKISPDVSGEIIELNVEEGDSVVKGQLLLRIRPDNYQSMVDAQQ 109

Query: 92  ---NPTPQALTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAK 148
              N     L  A   L Q++AN     Q       L +Q++I  +  ++   +A+  A 
Sbjct: 110 ASVNTMRANLAQAKARLAQAQANFAQVEQNYKRNRPLFEQKVI--SQSEWQEIEANYLAT 167

Query: 149 QAEVQQKRQNLEL----IRSGEASIGQAKLS---STLYAPISGTILNIKVEVGEPIISTE 201
           + EV+  RQ++      +++ +AS+  A+ +   +T+YAP+SGT+  + VE GE ++ T 
Sbjct: 168 KQEVESARQSVRASEFNVQNAQASLKDARENLNKTTIYAPVSGTVSKLNVEQGERVVGT- 226

Query: 202 SSQAATEMIQLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP--EQVINGQLTKVAI 259
           S  A TE++++A++ N+  + +V+E+D  ++  G    + V  Y   ++   G +T +A 
Sbjct: 227 SQMAGTEIMRIANLNNMEVRVNVNENDIIRVALGDSVIVEVDSYTSRDEKFKGVVTSIA- 285

Query: 260 QSERLNNPENKDGKSFDNGFQVEIGQLD-----IPENMT--LRSGFSASAKITLQRAADV 312
                N  ++         F+V I  L+     + +N++   R G +AS  I   + ++V
Sbjct: 286 -----NTAKDATTLEAVTEFEVRIRLLNQSYDHLRKNISRPFRPGMTASVDIITDKKSNV 340

Query: 313 ITLPERAL--------------QFEGETP----------------MVLIADGSAQGYTAH 342
           +++P  A+              + E E P                +V + D ++      
Sbjct: 341 LSVPLSAVTTRSTDMPDAEEPGENEEEAPQDQQQAKPAAPAQVEEVVFVYDEASNTVQTA 400

Query: 343 PVKLGLSDGVQVEILEGVAEKDSIV 367
            VK G+SD   +EI+ G+     +V
Sbjct: 401 KVKTGISDFEHIEIISGLKPGQKVV 425