Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 83/352 (23%), Positives = 143/352 (40%), Gaps = 54/352 (15%)

Query: 32  PLPTLNVSRGTIEKQAVAVGQIMPSHSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRP 91
           P+ T  VS  ++  +    G ++P   V ++ Q++G +  IYV +GQ V+QGQ L ++  
Sbjct: 39  PVNTYQVSEQSVTGKDTYPGTVVPLQEVELRPQVSGYITNIYVEDGQRVKQGQKLYEIDQ 98

Query: 92  NPTPQALTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVR-----AKADVK 146
           +     L  A   L  ++ANL    + L   ERL ++  I     DY R     AKA V 
Sbjct: 99  SKYQAGLQQARANLQSAKANLARVQKDLERYERLAERDAIAKQQVDYARTEVQTAKAQVA 158

Query: 147 AKQAEVQQKRQNLELIRSGEASIGQAKLSSTLYAPISGTI------LNIKVEVGEPIIST 200
           + +A+VQ          S    +G A ++    AP SGTI      +  +V  G+P+++T
Sbjct: 159 SAEAQVQ----------SASTDVGYAVIN----APFSGTIGISQVRVGAQVSPGQPLLNT 204

Query: 201 ESSQAATEMIQLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYPEQVINGQLTKVAIQ 260
            SS           M  I    +++E +  +       +   + +   + NG+       
Sbjct: 205 ISS-----------MDPIAVDFAINEQEIPRFVKLQQGNQPDSLFTLTLNNGE------- 246

Query: 261 SERLNNPENKDGKSFDNGFQVEIG----QLDIPE-NMTLRSGFSASAKITLQRAADVITL 315
                 P N    + D     + G    ++  P  N  L  G + +  +  Q   D + +
Sbjct: 247 ----KYPHNGKLLAIDRAIGRQSGTTTVRVQFPNPNAVLIPGMTVTVNVLNQDIGDQLVI 302

Query: 316 PERALQFEGETPMVLIADGSAQGYTAHPVKLGLSDGVQVEILEGVAEKDSIV 367
           P +A+  +     V +  G +       V+LG      V + EG+ E   IV
Sbjct: 303 PNKAVAEQLGEFYVYVVQGDS--VVQQNVQLGTRVNGNVVVREGLKEGQQIV 352