Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., efflux RND transporter periplasmic adaptor subunit from Fusobacterium nucleatum SB010

 Score =  108 bits (270), Expect = 3e-28
 Identities = 85/379 (22%), Positives = 177/379 (46%), Gaps = 17/379 (4%)

Query: 4   RWTLLATLVGVGLAGGYYTLTYTPESSSPLPTLNVSRGTIEKQAVAVGQIMPSHSVAIKS 63
           +W +L  ++ +G+   YY+     +      T  V R  I +  VA G +  ++ V + +
Sbjct: 7   KWIILIIVLILGVV--YYSFFRKKDDGVKYLTETVKRSDISQTIVASGTVRSNNRVEVGA 64

Query: 64  QINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDASTELMQSEANLESDLQRL---- 119
           Q++G + +I V  GQ V++G  +  +        L +A ++L   +A  +S   +     
Sbjct: 65  QVSGKITKINVVLGQEVKKGDLIATIDSLTQNNNLDEAKSKLKVYQAQRKSASVKYQVAR 124

Query: 120 ANLERLVK-QQIIPANYDDYVRAKADVKAKQAEVQQKRQNLELIRSGEASIGQAKLS--- 175
           +   R+ K  Q+   + DDY  AK +++  +A V +     ELI     S+  A+ +   
Sbjct: 125 SKFNRISKLYQMNSISQDDYETAKEELEVAKASVTEYD---ELIAQASISVKTAETNLSY 181

Query: 176 STLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDAAQLNAG 235
           +++ +PI G +++I V  G+ +    S+Q+A  ++Q+AD+  ++ K  V+E D  ++  G
Sbjct: 182 TSITSPIDGVVISIPVSEGQTV---NSNQSAPTIVQVADLSKMLIKAEVAEGDITKVKKG 238

Query: 236 MPASITVAPYPEQVINGQLTKVAIQSERLNNPENKDGKSFDNGFQVEIGQLDIPENMTLR 295
           M   +     P++     +  V   +  L + E  +  S  +        +   ++  LR
Sbjct: 239 MEVEVATVANPDKTYKSTVQSVDYATSTLTDNEYSESVSNTSAVYYYANIILDNKDGNLR 298

Query: 296 SGFSASAKITLQRAADVITLPERALQ-FEGETPMVLIADGSAQGYTAHPVKLGLSDGVQV 354
            G + +  IT+    +V+++P  A+Q   G++ + ++ D          V  G+ DG+ +
Sbjct: 299 IGMTTTNTITINSVKNVLSVPVVAVQKVNGKSVVKVVKDKEKNIIEEREVTTGIQDGLSI 358

Query: 355 EILEGVAEKDSIVDNSMLG 373
           EI  G++E + +V   + G
Sbjct: 359 EIKSGLSEGEEVVVTQLNG 377