Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score = 80.9 bits (198), Expect = 6e-20
 Identities = 90/389 (23%), Positives = 164/389 (42%), Gaps = 43/389 (11%)

Query: 5   WTLLATLVGVGLAGGYYTLTYTPESSSPLP---TLNVSRGTIEKQAVAVGQIMPSHSVAI 61
           W LLA L  + L      + +     +P+P   T  V   ++++  +A G +     V++
Sbjct: 11  WWLLAGLAAITLF-----VVFRLSRPAPVPNYITATVDVRSLQQTVLADGTVNARKLVSV 65

Query: 62  KSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDASTELMQSEA----------N 111
            +Q++G +  + V  G  V+QGQ L ++        L D+   L   +A          N
Sbjct: 66  GAQVSGQIRALNVSLGDKVKQGQLLAEIDDLTQQNTLRDSKAALDDIQAQRASRQATLRN 125

Query: 112 LESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLELIRSGEA-SIG 170
            + + QR  NL  + K   + A+YD    AKA + A QA++     + +++R+  A +  
Sbjct: 126 NQLNWQRQHNL--MQKGLGVQADYDS---AKATLDAAQADIHAL--DAQIVRANIAVNTA 178

Query: 171 QAKLSST-LYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDA 229
           Q  L+ T + +PI+GT++ + VE G+ + + +S+     + ++A +  +  +  +SE D 
Sbjct: 179 QVNLAYTKIVSPIAGTVVALPVEQGQTVNAVQSTPT---IAKVATLDTMTIEAKISEADV 235

Query: 230 AQLNAGMPASITVAPYPEQVINGQLTKVAIQSERLNNPENKDGKSFDNG----------- 278
             +  GMP   T+   P +     L  +    E L+N       S               
Sbjct: 236 INVRTGMPVWFTILGAPNKRYQAVLRAIEPAPESLSNESAATSNSTTGSSASSSSSRSAI 295

Query: 279 FQVEIGQLDIPENMTLRSGFSASAKITLQRAADVITLPERALQFEGETPMVLIADGSAQG 338
           +   +  +D P+  TLR   +A   I L  A   I  P  AL        V +     + 
Sbjct: 296 YYNGLFDVDNPDE-TLRISMTAQVYILLSEAKRAIVAPVSALINRQGKLFVQVTQPQGRP 354

Query: 339 YTAHPVKLGLSDGVQVEILEGVAEKDSIV 367
                V  G+SD   +++L GV   + +V
Sbjct: 355 -ELREVTTGISDNAYIQLLSGVQPGEEVV 382